(11 nodes) TRAPP complex network (Plasmodium yoelii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PY07060	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (195 aa)
	PY06123	Uncharacterized protein. (856 aa)
	PY05729	Uncharacterized protein. (153 aa)
	PY05174	41-2 protein antigen-related. (115 aa)
	PY04582	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (133 aa)
	PY04375	Uncharacterized protein. (81 aa)
	PY03378	cDNA EST yk491a11.5 comes from this gene, putative. (207 aa)
	PY02475	41 kDa antigen-related. (58 aa)
	PY02417	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (187 aa)
	PY02194	Uncharacterized protein. (1540 aa)
	PY02193	Uncharacterized protein. (286 aa)

Your Current Organism:

Plasmodium yoelii

NCBI taxonomy Id: 73239
Other names: P. yoelii yoelii, Plasmodium yoelii subsp. yoelii, Plasmodium yoelii yoelii

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PY02193	PY02194	Q7RMI7	Q7RMI6	Uncharacterized protein.	Uncharacterized protein.	0.549
PY02193	PY02417	Q7RMI7	Q7RLX1	Uncharacterized protein.	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.976
PY02193	PY02475	Q7RMI7	Q7RLR5	Uncharacterized protein.	41 kDa antigen-related.	0.919
PY02193	PY03378	Q7RMI7	Q7RJ85	Uncharacterized protein.	cDNA EST yk491a11.5 comes from this gene, putative.	0.977
PY02193	PY04375	Q7RMI7	Q7RGH2	Uncharacterized protein.	Uncharacterized protein.	0.821
PY02193	PY04582	Q7RMI7	Q7RFX0	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.974
PY02193	PY05174	Q7RMI7	Q7RE91	Uncharacterized protein.	41-2 protein antigen-related.	0.919
PY02193	PY05729	Q7RMI7	Q7RCP8	Uncharacterized protein.	Uncharacterized protein.	0.977
PY02193	PY06123	Q7RMI7	Q7RBL8	Uncharacterized protein.	Uncharacterized protein.	0.917
PY02193	PY07060	Q7RMI7	Q7R910	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.976
PY02194	PY02193	Q7RMI6	Q7RMI7	Uncharacterized protein.	Uncharacterized protein.	0.549
PY02194	PY02417	Q7RMI6	Q7RLX1	Uncharacterized protein.	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.976
PY02194	PY02475	Q7RMI6	Q7RLR5	Uncharacterized protein.	41 kDa antigen-related.	0.919
PY02194	PY03378	Q7RMI6	Q7RJ85	Uncharacterized protein.	cDNA EST yk491a11.5 comes from this gene, putative.	0.977
PY02194	PY04375	Q7RMI6	Q7RGH2	Uncharacterized protein.	Uncharacterized protein.	0.821
PY02194	PY04582	Q7RMI6	Q7RFX0	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.974
PY02194	PY05174	Q7RMI6	Q7RE91	Uncharacterized protein.	41-2 protein antigen-related.	0.919
PY02194	PY05729	Q7RMI6	Q7RCP8	Uncharacterized protein.	Uncharacterized protein.	0.977
PY02194	PY06123	Q7RMI6	Q7RBL8	Uncharacterized protein.	Uncharacterized protein.	0.917
PY02194	PY07060	Q7RMI6	Q7R910	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.976