(64 nodes) Golgi vesicle transport network (Plasmodium yoelii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PY00354	Uncharacterized protein. (759 aa)
	PY00381	Zinc finger protein Glo3-like, putative. (434 aa)
	PY00467	Sec1 family; Belongs to the STXBP/unc-18/SEC1 family. (643 aa)
	PY00471	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (494 aa)
	PY00476	GOLD domain-containing protein. (112 aa)
	PY00655	Uncharacterized protein. (124 aa)
	PY00656	COG2 domain-containing protein. (319 aa)
	PY00718	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (995 aa)
	PY00721	Rab6. (282 aa)
	PY01045	AlphaCop gene product. (1283 aa)
	PY01094	Uncharacterized protein. (963 aa)
	PY01272	Coatomer beta subunit. (1286 aa)
	PY01316	Origin recognition complex 1 protein. (407 aa)
	PY06850	Uncharacterized protein. (673 aa)
	PY01387	Uncharacterized protein. (634 aa)
	PY01574	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (597 aa)
	PY01819	V-SNARE coiled-coil homology domain-containing protein. (62 aa)
	PY01820	Longin domain-containing protein; Belongs to the synaptobrevin family. (128 aa)
	PY01823	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (211 aa)
	PY01892	Uncharacterized protein. (300 aa)
	PY02193	Uncharacterized protein. (286 aa)
	PY02194	Uncharacterized protein. (1540 aa)
	PY02417	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (187 aa)
	PY02418	C-13 antigen-related. (565 aa)
	PY02475	41 kDa antigen-related. (58 aa)
	PY02496	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (109 aa)
	PY02497	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (676 aa)
	PY02646	Dopey_N domain-containing protein. (1230 aa)
	PY02647	Plasmodium vivax PV1H14195_P-related. (769 aa)
	PY02776	Ring-infested erythrocyte surface antigen, putative. (542 aa)
	PY03050	Uncharacterized protein. (1272 aa)
	PY03378	cDNA EST yk491a11.5 comes from this gene, putative. (207 aa)
	PY03775	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (426 aa)
	PY03828	ADP-ribosylation factor GTPase-activating protein. (296 aa)
	PY03887	Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)
	PY03895	Putative Sec24-like protein. (1396 aa)
	PY03930	WD_REPEATS_REGION domain-containing protein. (1249 aa)
	PY03931	Uncharacterized protein. (185 aa)
	PY03949	Uncharacterized protein. (313 aa)
	PY04027	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (213 aa)
	PY04122	Development protein DG1124. (325 aa)
	PY04147	L-type lectin-like domain-containing protein. (499 aa)
	PY04367	Small GTP-binding protein; Belongs to the small GTPase superfamily. SAR1 family. (185 aa)
	PY04375	Uncharacterized protein. (81 aa)
	PY04582	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (133 aa)
	PY05156	DNA-directed RNA polymerase beta chain. (863 aa)
	PY05174	41-2 protein antigen-related. (115 aa)
	PY05552	Er lumen protein retaining receptor-related. (46 aa)
	PY05566	GOLD domain-containing protein. (371 aa)
	PY05628	ATPase, AAA family, putative. (776 aa)
	PY05729	Uncharacterized protein. (153 aa)
	PY05987	Coatomer beta' subunit. (816 aa)
	PY06123	Uncharacterized protein. (856 aa)
	PY06403	ER lumen protein retaining receptor-like protein, putative. (284 aa)
	PY06414	Transmembrane protein tmp21. (214 aa)
	PY06525	Uncharacterized protein. (490 aa)
	PY00224	COPI_C domain-containing protein. (50 aa)
	PY07006	Uncharacterized protein. (78 aa)
	PY07007	Syntaxin 5. (140 aa)
	PY07060	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (195 aa)
	PY07410	Syntaxin 5. (173 aa)
	PY07464	Uncharacterized protein. (136 aa)
	PY06640	Arabidopsis thaliana At1g71270/F3I17_8. (1050 aa)
	PY06693	Uncharacterized protein. (116 aa)

Your Current Organism:

Plasmodium yoelii

NCBI taxonomy Id: 73239
Other names: P. yoelii yoelii, Plasmodium yoelii subsp. yoelii, Plasmodium yoelii yoelii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PY00224	PY00381	Q7RSX8	Q7RSH6	COPI_C domain-containing protein.	Zinc finger protein Glo3-like, putative.	0.865
PY00224	PY00471	Q7RSX8	Q7RS92	COPI_C domain-containing protein.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.989
PY00224	PY00476	Q7RSX8	Q7RS87	COPI_C domain-containing protein.	GOLD domain-containing protein.	0.660
PY00224	PY00718	Q7RSX8	Q7RRK1	COPI_C domain-containing protein.	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.988
PY00224	PY01094	Q7RSX8	Q7RQK2	COPI_C domain-containing protein.	Uncharacterized protein.	0.418
PY00224	PY01272	Q7RSX8	Q7RQ31	COPI_C domain-containing protein.	Coatomer beta subunit.	0.965
PY00224	PY01316	Q7RSX8	Q7RPY8	COPI_C domain-containing protein.	Origin recognition complex 1 protein.	0.731
PY00224	PY01819	Q7RSX8	Q7RNJ7	COPI_C domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.659
PY00224	PY01820	Q7RSX8	Q7RNJ6	COPI_C domain-containing protein.	Longin domain-containing protein; Belongs to the synaptobrevin family.	0.659
PY00224	PY01892	Q7RSX8	Q7RNC8	COPI_C domain-containing protein.	Uncharacterized protein.	0.979
PY00224	PY02496	Q7RSX8	Q7RLP4	COPI_C domain-containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.488
PY00224	PY02497	Q7RSX8	Q7RLP3	COPI_C domain-containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.488
PY00224	PY03828	Q7RSX8	Q7RI03	COPI_C domain-containing protein.	ADP-ribosylation factor GTPase-activating protein.	0.865
PY00224	PY03887	Q7RSX8	Q7RHU6	COPI_C domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.695
PY00224	PY03930	Q7RSX8	Q7RHQ4	COPI_C domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.460
PY00224	PY03931	Q7RSX8	Q7RHQ3	COPI_C domain-containing protein.	Uncharacterized protein.	0.460
PY00224	PY04027	Q7RSX8	Q7RHG0	COPI_C domain-containing protein.	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	0.978
PY00224	PY05156	Q7RSX8	Q7REA9	COPI_C domain-containing protein.	DNA-directed RNA polymerase beta chain.	0.948
PY00224	PY05552	Q7RSX8	Q7RD72	COPI_C domain-containing protein.	Er lumen protein retaining receptor-related.	0.681
PY00224	PY05566	Q7RSX8	Q7RD59	COPI_C domain-containing protein.	GOLD domain-containing protein.	0.660