(24 nodes) Vesicle tethering complex network (Plasmodium yoelii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PY05174	41-2 protein antigen-related. (115 aa)
	PY05729	Uncharacterized protein. (153 aa)
	PY06123	Uncharacterized protein. (856 aa)
	PY06458	Vps39_2 domain-containing protein. (373 aa)
	PY02193	Uncharacterized protein. (286 aa)
	PY06525	Uncharacterized protein. (490 aa)
	PY06640	Arabidopsis thaliana At1g71270/F3I17_8. (1050 aa)
	PY04582	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (133 aa)
	PY04375	Uncharacterized protein. (81 aa)
	PY04374	Expressed protein. (1097 aa)
	PY03378	cDNA EST yk491a11.5 comes from this gene, putative. (207 aa)
	PY03107	Vacuolar membrane protein pep3. (1399 aa)
	PY03050	Uncharacterized protein. (1272 aa)
	PY02776	Ring-infested erythrocyte surface antigen, putative. (542 aa)
	PY02475	41 kDa antigen-related. (58 aa)
	PY02417	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (187 aa)
	PY02218	VCL1. (965 aa)
	PY07060	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (195 aa)
	PY07085	CNH domain-containing protein. (945 aa)
	PY02194	Uncharacterized protein. (1540 aa)
	PY02098	Vps53_N domain-containing protein. (790 aa)
	PY00655	Uncharacterized protein. (124 aa)
	PY01196	Vacuolar protein sorting homolog r-vps33a; Belongs to the STXBP/unc-18/SEC1 family. (1210 aa)
	PY00656	COG2 domain-containing protein. (319 aa)

Your Current Organism:

Plasmodium yoelii

NCBI taxonomy Id: 73239
Other names: P. yoelii yoelii, Plasmodium yoelii subsp. yoelii, Plasmodium yoelii yoelii

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PY00655	PY00656	Q7RRR3	Q7RRR2	Uncharacterized protein.	COG2 domain-containing protein.	0.566
PY00655	PY02098	Q7RRR3	Q7RMT0	Uncharacterized protein.	Vps53_N domain-containing protein.	0.752
PY00655	PY02776	Q7RRR3	Q7RKX3	Uncharacterized protein.	Ring-infested erythrocyte surface antigen, putative.	0.659
PY00655	PY03050	Q7RRR3	Q7RK53	Uncharacterized protein.	Uncharacterized protein.	0.963
PY00655	PY06525	Q7RRR3	Q7RAH5	Uncharacterized protein.	Uncharacterized protein.	0.659
PY00655	PY06640	Q7RRR3	Q7RA63	Uncharacterized protein.	Arabidopsis thaliana At1g71270/F3I17_8.	0.749
PY00656	PY00655	Q7RRR2	Q7RRR3	COG2 domain-containing protein.	Uncharacterized protein.	0.566
PY00656	PY02098	Q7RRR2	Q7RMT0	COG2 domain-containing protein.	Vps53_N domain-containing protein.	0.752
PY00656	PY02776	Q7RRR2	Q7RKX3	COG2 domain-containing protein.	Ring-infested erythrocyte surface antigen, putative.	0.659
PY00656	PY03050	Q7RRR2	Q7RK53	COG2 domain-containing protein.	Uncharacterized protein.	0.963
PY00656	PY06525	Q7RRR2	Q7RAH5	COG2 domain-containing protein.	Uncharacterized protein.	0.659
PY00656	PY06640	Q7RRR2	Q7RA63	COG2 domain-containing protein.	Arabidopsis thaliana At1g71270/F3I17_8.	0.749
PY01196	PY02098	Q7RQA5	Q7RMT0	Vacuolar protein sorting homolog r-vps33a; Belongs to the STXBP/unc-18/SEC1 family.	Vps53_N domain-containing protein.	0.566
PY01196	PY02218	Q7RQA5	Q7RMG2	Vacuolar protein sorting homolog r-vps33a; Belongs to the STXBP/unc-18/SEC1 family.	VCL1.	0.999
PY01196	PY03107	Q7RQA5	Q7RJZ8	Vacuolar protein sorting homolog r-vps33a; Belongs to the STXBP/unc-18/SEC1 family.	Vacuolar membrane protein pep3.	0.999
PY01196	PY04374	Q7RQA5	Q7RGH3	Vacuolar protein sorting homolog r-vps33a; Belongs to the STXBP/unc-18/SEC1 family.	Expressed protein.	0.998
PY01196	PY06458	Q7RQA5	Q7RAP1	Vacuolar protein sorting homolog r-vps33a; Belongs to the STXBP/unc-18/SEC1 family.	Vps39_2 domain-containing protein.	0.949
PY01196	PY07085	Q7RQA5	Q7R8Y5	Vacuolar protein sorting homolog r-vps33a; Belongs to the STXBP/unc-18/SEC1 family.	CNH domain-containing protein.	0.949
PY02098	PY00655	Q7RMT0	Q7RRR3	Vps53_N domain-containing protein.	Uncharacterized protein.	0.752
PY02098	PY00656	Q7RMT0	Q7RRR2	Vps53_N domain-containing protein.	COG2 domain-containing protein.	0.752