(6 nodes) SNARE network (Plasmodium yoelii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PY02377	Uncharacterized protein. (100 aa)
	PY07410	Syntaxin 5. (173 aa)
	PY07007	Syntaxin 5. (140 aa)
	PY04059	t-SNARE coiled-coil homology domain-containing protein. (395 aa)
	PY03571	t-SNARE coiled-coil homology domain-containing protein. (326 aa)
	PY03484	t-SNARE coiled-coil homology domain-containing protein. (333 aa)

Your Current Organism:

Plasmodium yoelii

NCBI taxonomy Id: 73239
Other names: P. yoelii yoelii, Plasmodium yoelii subsp. yoelii, Plasmodium yoelii yoelii

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PY02377	PY07007	Q7RM11	Q7R959	Uncharacterized protein.	Syntaxin 5.	0.630
PY02377	PY07410	Q7RM11	Q7R813	Uncharacterized protein.	Syntaxin 5.	0.630
PY03484	PY07007	Q7RIY2	Q7R959	t-SNARE coiled-coil homology domain-containing protein.	Syntaxin 5.	0.961
PY03484	PY07410	Q7RIY2	Q7R813	t-SNARE coiled-coil homology domain-containing protein.	Syntaxin 5.	0.630
PY03571	PY07007	Q7RIP6	Q7R959	t-SNARE coiled-coil homology domain-containing protein.	Syntaxin 5.	0.410
PY03571	PY07410	Q7RIP6	Q7R813	t-SNARE coiled-coil homology domain-containing protein.	Syntaxin 5.	0.410
PY04059	PY07007	Q7RHD0	Q7R959	t-SNARE coiled-coil homology domain-containing protein.	Syntaxin 5.	0.630
PY04059	PY07410	Q7RHD0	Q7R813	t-SNARE coiled-coil homology domain-containing protein.	Syntaxin 5.	0.630
PY07007	PY02377	Q7R959	Q7RM11	Syntaxin 5.	Uncharacterized protein.	0.630
PY07007	PY03484	Q7R959	Q7RIY2	Syntaxin 5.	t-SNARE coiled-coil homology domain-containing protein.	0.961
PY07007	PY03571	Q7R959	Q7RIP6	Syntaxin 5.	t-SNARE coiled-coil homology domain-containing protein.	0.410
PY07007	PY04059	Q7R959	Q7RHD0	Syntaxin 5.	t-SNARE coiled-coil homology domain-containing protein.	0.630
PY07410	PY02377	Q7R813	Q7RM11	Syntaxin 5.	Uncharacterized protein.	0.630
PY07410	PY03484	Q7R813	Q7RIY2	Syntaxin 5.	t-SNARE coiled-coil homology domain-containing protein.	0.630
PY07410	PY03571	Q7R813	Q7RIP6	Syntaxin 5.	t-SNARE coiled-coil homology domain-containing protein.	0.410
PY07410	PY04059	Q7R813	Q7RHD0	Syntaxin 5.	t-SNARE coiled-coil homology domain-containing protein.	0.630