STRINGSTRING
FF38_11102 FF38_11102 FF38_03759 FF38_03759 FF38_10636 FF38_10636 FF38_00014 FF38_00014 FF38_03493 FF38_03493 FF38_06971 FF38_06971 FF38_14021 FF38_14021 FF38_14008 FF38_14008 FF38_14024 FF38_14024 FF38_05040 FF38_05040 FF38_10250 FF38_10250 FF38_03805 FF38_03805 FF38_10799 FF38_10799 FF38_07202 FF38_07202 FF38_07950 FF38_07950 FF38_04724 FF38_04724 FF38_04714 FF38_04714 FF38_04975 FF38_04975 FF38_04972 FF38_04972 FF38_03091 FF38_03091 FF38_02936 FF38_02936 FF38_00689 FF38_00689 FF38_00667 FF38_00667 FF38_14242 FF38_14242 LSM8 LSM8 FF38_04011 FF38_04011 FF38_04028 FF38_04028 FF38_05881 FF38_05881 FF38_13439 FF38_13439 FF38_06272 FF38_06272 FF38_12546 FF38_12546 FF38_02273 FF38_02273 FF38_07551 FF38_07551 FF38_11263 FF38_11263 FF38_09886 FF38_09886 FF38_00095 FF38_00095 FF38_00420 FF38_00420 FF38_00412 FF38_00412 FF38_07489 FF38_07489 FF38_02081 FF38_02081 FF38_09829 FF38_09829 FF38_05035 FF38_05035 FF38_02698 FF38_02698 FF38_03802 FF38_03802 FF38_06867 FF38_06867 FF38_01781 FF38_01781 FF38_11355 FF38_11355 FF38_13245 FF38_13245 FF38_10893 FF38_10893 FF38_09900 FF38_09900 FF38_03613 FF38_03613 LSM5 LSM5 FF38_09672 FF38_09672 FF38_09148 FF38_09148 FF38_09374 FF38_09374 FF38_01975 FF38_01975 FF38_09329 FF38_09329 FF38_02939 FF38_02939 FF38_07233 FF38_07233 FF38_12121 FF38_12121 FF38_08795 FF38_08795 FF38_01869 FF38_01869 FF38_02933 FF38_02933 FF38_10723 FF38_10723 FF38_10748 FF38_10748 FF38_02820 FF38_02820 FF38_14437 FF38_14437 FF38_00806 FF38_00806 FF38_13728 FF38_13728 FF38_01196 FF38_01196 FF38_13822 FF38_13822 FF38_01295 FF38_01295 FF38_05596 FF38_05596 FF38_05625 FF38_05625 FF38_01320 FF38_01320 FF38_07435 FF38_07435 FF38_13325 FF38_13325 FF38_04568 FF38_04568 FF38_04629 FF38_04629 FF38_14185 FF38_14185 FF38_04267 FF38_04267 FF38_14169 FF38_14169 FF38_10524 FF38_10524 FF38_00065 FF38_00065 FF38_09630 FF38_09630 FF38_02227 FF38_02227 FF38_10222 FF38_10222 FF38_12275 FF38_12275 FF38_06003 FF38_06003 FF38_09346 FF38_09346 FF38_13680 FF38_13680 FF38_11217 FF38_11217 FF38_03722 FF38_03722 FF38_12279 FF38_12279 FF38_07409 FF38_07409 FF38_02186 FF38_02186 FF38_08093 FF38_08093 FF38_09208 FF38_09208 FF38_09632 FF38_09632 FF38_02612 FF38_02612 FF38_04854 FF38_04854 FF38_05791 FF38_05791 FF38_12965 FF38_12965 FF38_10451 FF38_10451 FF38_07878 FF38_07878 FF38_03012 FF38_03012 FF38_12878 FF38_12878 FF38_12886 FF38_12886 FF38_10376 FF38_10376 FF38_11853 FF38_11853 FF38_11837 FF38_11837 FF38_05385 FF38_05385 FF38_05383 FF38_05383 FF38_07611 FF38_07611 FF38_08581 FF38_08581 FF38_08582 FF38_08582 FF38_08591 FF38_08591 FF38_12931 FF38_12931 FF38_12950 FF38_12950 FF38_10082 FF38_10082 FF38_08583 FF38_08583 FF38_08603 FF38_08603 FF38_09990 FF38_09990 FF38_06344 FF38_06344 FF38_12995 FF38_12995 FF38_10956 FF38_10956 FF38_02335 FF38_02335 FF38_01166 FF38_01166 FF38_10782 FF38_10782 FF38_13849 FF38_13849 FF38_12661 FF38_12661 FF38_08577 FF38_08577 FF38_12319 FF38_12319 FF38_10485 FF38_10485 LSM4 LSM4 FF38_04820 FF38_04820 FF38_06476 FF38_06476 FF38_07089 FF38_07089 FF38_01184 FF38_01184 FF38_07968 FF38_07968 FF38_03467 FF38_03467 FF38_10844 FF38_10844 FF38_10856 FF38_10856 FF38_14492 FF38_14492 FF38_06146 FF38_06146 FF38_06196 FF38_06196 FF38_04378 FF38_04378 FF38_06750 FF38_06750 FF38_06266 FF38_06266 FF38_04360 FF38_04360 FF38_10488 FF38_10488 FF38_03016 FF38_03016 FF38_06288 FF38_06288 FF38_05707 FF38_05707 FF38_04883 FF38_04883 FF38_09462 FF38_09462 FF38_02890 FF38_02890 FF38_02809 FF38_02809 FF38_05256 FF38_05256 FF38_09684 FF38_09684 FF38_08338 FF38_08338 FF38_07527 FF38_07527 FF38_13149 FF38_13149 FF38_13995 FF38_13995 FF38_01387 FF38_01387 FF38_02409 FF38_02409 FF38_10619 FF38_10619 FF38_11568 FF38_11568 FF38_05212 FF38_05212 FF38_05239 FF38_05239 FF38_11440 FF38_11440 FF38_05251 FF38_05251 FF38_08539 FF38_08539 FF38_03058 FF38_03058 FF38_03060 FF38_03060 FF38_14148 FF38_14148 FF38_00828 FF38_00828 FF38_11526 FF38_11526 FF38_00561 FF38_00561 FF38_07654 FF38_07654 FF38_06652 FF38_06652 FF38_02246 FF38_02246 FF38_11588 FF38_11588 FF38_03934 FF38_03934 FF38_03769 FF38_03769 FF38_03962 FF38_03962 FF38_03969 FF38_03969 FF38_06649 FF38_06649 FF38_13958 FF38_13958 FF38_13951 FF38_13951 FF38_14399 FF38_14399 FF38_14302 FF38_14302 FF38_11696 FF38_11696 FF38_06969 FF38_06969 FF38_07063 FF38_07063 FF38_12742 FF38_12742 FF38_01073 FF38_01073 FF38_12813 FF38_12813 FF38_12427 FF38_12427 FF38_07060 FF38_07060
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FF38_11102Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
FF38_03759Putative CWF19-like protein 2. (717 aa)
FF38_10636Putative U5 small nuclear ribonucleoprotein 200 kDa helicase. (2142 aa)
FF38_00014Pre-mRNA branch site p14-like protein. (121 aa)
FF38_03493Tr-type G domain-containing protein. (975 aa)
FF38_06971Small nuclear ribonucleoprotein-associated protein B. (191 aa)
FF38_14021Sde2_N_Ubi domain-containing protein. (259 aa)
FF38_14008SFM domain-containing protein. (341 aa)
FF38_14024Uncharacterized protein. (469 aa)
FF38_05040U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (558 aa)
FF38_10250WD_REPEATS_REGION domain-containing protein. (474 aa)
FF38_03805Uncharacterized protein. (568 aa)
FF38_10799RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (166 aa)
FF38_07202G-patch domain-containing protein. (488 aa)
FF38_07950Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (148 aa)
FF38_04724TPR_REGION domain-containing protein. (959 aa)
FF38_04714RRM domain-containing protein. (410 aa)
FF38_04975ATP-dependent RNA helicase abstrakt. (625 aa)
FF38_04972Uncharacterized protein. (425 aa)
FF38_03091Puff-specific protein Bx42. (544 aa)
FF38_02936Uncharacterized protein. (787 aa)
FF38_00689Putative small nuclear ribonucleoprotein E. (673 aa)
FF38_00667RNA-binding protein Rsf1. (220 aa)
FF38_14242Heat shock 70 kDa protein cognate 4; Belongs to the heat shock protein 70 family. (652 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
FF38_04011J domain-containing protein. (292 aa)
FF38_04028Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (149 aa)
FF38_05881Uncharacterized protein. (669 aa)
FF38_13439Helicase ATP-binding domain-containing protein. (755 aa)
FF38_06272Uncharacterized protein. (546 aa)
FF38_12546Small nuclear ribonucleoprotein Sm D2. (122 aa)
FF38_02273Uncharacterized protein. (327 aa)
FF38_07551DUF2040 domain-containing protein. (399 aa)
FF38_11263TOG domain-containing protein. (1317 aa)
FF38_09886RRM domain-containing protein. (271 aa)
FF38_00095Survival motor neuron protein. (217 aa)
FF38_00420UPF0396 protein. (469 aa)
FF38_00412PPIase cyclophilin-type domain-containing protein. (909 aa)
FF38_07489PWI domain-containing protein. (1239 aa)
FF38_02081Tudor domain-containing protein. (241 aa)
FF38_09829Uncharacterized protein. (507 aa)
FF38_05035U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (430 aa)
FF38_02698Uncharacterized protein. (144 aa)
FF38_03802Uncharacterized protein. (630 aa)
FF38_06867Uncharacterized protein. (1031 aa)
FF38_01781Protein kinase domain-containing protein. (917 aa)
FF38_11355Protein kinase domain-containing protein. (253 aa)
FF38_13245Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
FF38_10893Uncharacterized protein. (408 aa)
FF38_09900Uncharacterized protein. (260 aa)
FF38_03613Protein kinase domain-containing protein. (1017 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
FF38_09672Nitric oxide synthase-interacting protein homolog. (293 aa)
FF38_09148Uncharacterized protein. (996 aa)
FF38_09374Uncharacterized protein. (889 aa)
FF38_01975Uncharacterized protein. (783 aa)
FF38_09329Cactin. (647 aa)
FF38_02939Uncharacterized protein. (126 aa)
FF38_07233U1-type domain-containing protein. (199 aa)
FF38_12121MPN domain-containing protein. (2396 aa)
FF38_08795Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (392 aa)
FF38_01869U1 small nuclear ribonucleoprotein 70 kDa. (429 aa)
FF38_02933Uncharacterized protein. (157 aa)
FF38_10723Cwf21 domain-containing protein. (1479 aa)
FF38_10748Uncharacterized protein. (214 aa)
FF38_02820Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
FF38_14437Uncharacterized protein. (374 aa)
FF38_00806Protein kinase domain-containing protein. (1472 aa)
FF38_13728Uncharacterized protein. (1296 aa)
FF38_01196Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (85 aa)
FF38_13822Helicase ATP-binding domain-containing protein. (704 aa)
FF38_01295J domain-containing protein. (249 aa)
FF38_05596Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (178 aa)
FF38_05625Uncharacterized protein. (801 aa)
FF38_01320Uncharacterized protein. (904 aa)
FF38_07435Uncharacterized protein. (341 aa)
FF38_13325Small nuclear ribonucleoprotein Sm D3. (147 aa)
FF38_04568Uncharacterized protein. (742 aa)
FF38_04629GCFC domain-containing protein. (930 aa)
FF38_14185Uncharacterized protein; Belongs to the DEAD box helicase family. (691 aa)
FF38_04267ATP-dependent RNA helicase p62; Belongs to the DEAD box helicase family. (593 aa)
FF38_14169U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
FF38_10524Uncharacterized protein. (1184 aa)
FF38_00065Septin-interacting protein 1. (862 aa)
FF38_09630PSP domain-containing protein. (795 aa)
FF38_02227Sm domain-containing protein. (112 aa)
FF38_10222Protein rigor mortis. (1230 aa)
FF38_12275CSD_1 domain-containing protein. (324 aa)
FF38_06003Uncharacterized protein. (992 aa)
FF38_09346Uncharacterized protein. (731 aa)
FF38_13680DSHCT domain-containing protein. (422 aa)
FF38_11217Protein mago nashi. (147 aa)
FF38_03722Protein suppressor of white apricot. (1036 aa)
FF38_12279Matrin-type domain-containing protein. (265 aa)
FF38_07409RRM domain-containing protein. (134 aa)
FF38_02186Uncharacterized protein. (225 aa)
FF38_08093Uncharacterized protein. (108 aa)
FF38_09208SF3A2 domain-containing protein. (194 aa)
FF38_09632Uncharacterized protein. (825 aa)
FF38_02612YTH domain-containing protein. (427 aa)
FF38_04854Uncharacterized protein. (897 aa)
FF38_05791Uncharacterized protein. (522 aa)
FF38_12965KOW domain-containing protein. (652 aa)
FF38_10451Zinc finger protein on ecdysone puffs. (489 aa)
FF38_07878Serine-arginine protein 55. (347 aa)
FF38_03012Uncharacterized protein. (328 aa)
FF38_12878Zinc finger protein on ecdysone puffs. (180 aa)
FF38_12886Uncharacterized protein. (311 aa)
FF38_10376Nop domain-containing protein. (502 aa)
FF38_11853RNA-binding protein squid. (319 aa)
FF38_11837ATP-dependent RNA helicase p62; Belongs to the DEAD box helicase family. (753 aa)
FF38_05385RNA-binding protein 1. (148 aa)
FF38_05383Ubiquitin-like protein 5. (73 aa)
FF38_07611PCI domain-containing protein. (865 aa)
FF38_08581Uncharacterized protein. (926 aa)
FF38_08582Uncharacterized protein. (971 aa)
FF38_08591DGCR14-like protein. (508 aa)
FF38_12931RRM domain-containing protein. (314 aa)
FF38_12950RRM domain-containing protein. (267 aa)
FF38_10082WW domain-containing protein. (369 aa)
FF38_08583Uncharacterized protein. (487 aa)
FF38_08603CWC15-like protein. (242 aa)
FF38_09990Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (183 aa)
FF38_06344Kin17_mid domain-containing protein. (469 aa)
FF38_12995Uncharacterized protein. (333 aa)
FF38_10956Uncharacterized protein. (923 aa)
FF38_02335Uncharacterized protein. (661 aa)
FF38_01166CPSF_A domain-containing protein. (1226 aa)
FF38_10782Splicing factor 3A subunit 3. (502 aa)
FF38_13849PPIase cyclophilin-type domain-containing protein. (504 aa)
FF38_12661Uncharacterized protein. (111 aa)
FF38_08577U1 small nuclear ribonucleoprotein A. (216 aa)
FF38_12319Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (643 aa)
FF38_10485Cir_N domain-containing protein. (562 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (152 aa)
FF38_04820Uncharacterized protein. (324 aa)
FF38_06476RRM domain-containing protein. (152 aa)
FF38_07089RRM domain-containing protein. (196 aa)
FF38_01184Uncharacterized protein. (963 aa)
FF38_07968Uncharacterized protein. (531 aa)
FF38_03467RNA-binding protein lark. (376 aa)
FF38_10844RRM domain-containing protein. (281 aa)
FF38_10856Putative G patch domain-containing protein 1. (956 aa)
FF38_14492SH2 domain-containing protein. (845 aa)
FF38_06146Uncharacterized protein. (846 aa)
FF38_06196U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (157 aa)
FF38_04378Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (155 aa)
FF38_06750Uncharacterized protein. (796 aa)
FF38_06266UPF0428 protein. (225 aa)
FF38_04360RRM domain-containing protein. (344 aa)
FF38_10488Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (310 aa)
FF38_03016Uncharacterized protein. (789 aa)
FF38_06288CCHC-type domain-containing protein. (813 aa)
FF38_05707Protein Gemin2. (543 aa)
FF38_04883Uncharacterized protein. (260 aa)
FF38_09462Uncharacterized protein. (342 aa)
FF38_02890ATP-dependent RNA helicase WM6. (455 aa)
FF38_02809Uncharacterized protein. (249 aa)
FF38_05256MFAP1 domain-containing protein. (475 aa)
FF38_09684Uncharacterized protein. (468 aa)
FF38_08338RRM domain-containing protein. (122 aa)
FF38_07527WD_REPEATS_REGION domain-containing protein. (532 aa)
FF38_13149Uncharacterized protein. (877 aa)
FF38_13995Protein aubergine; Belongs to the argonaute family. (898 aa)
FF38_01387Uncharacterized protein. (1180 aa)
FF38_02409Putative coiled-coil domain-containing protein 130. (369 aa)
FF38_10619WD_REPEATS_REGION domain-containing protein. (346 aa)
FF38_11568Putative N6-adenosine-methyltransferase MT-A70-like protein; Belongs to the MT-A70-like family. (672 aa)
FF38_05212Uncharacterized protein; Belongs to the DEAD box helicase family. (400 aa)
FF38_05239Pre-mRNA-processing factor 39. (1193 aa)
FF38_11440Uncharacterized protein. (1482 aa)
FF38_05251Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (244 aa)
FF38_08539Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (616 aa)
FF38_03058Uncharacterized protein. (383 aa)
FF38_03060Protein crooked neck. (743 aa)
FF38_14148Poly(U)-binding-splicing factor half pint. (679 aa)
FF38_00828Pre-mRNA-splicing factor Slu7. (603 aa)
FF38_11526Putative U2 small nuclear ribonucleoprotein A. (265 aa)
FF38_00561WD_REPEATS_REGION domain-containing protein. (578 aa)
FF38_07654Uncharacterized protein. (1526 aa)
FF38_06652Matrin-type domain-containing protein. (160 aa)
FF38_02246Helicase C-terminal domain-containing protein. (534 aa)
FF38_11588Helicase ATP-binding domain-containing protein. (541 aa)
FF38_03934Splicing factor U2af 38 kDa subunit. (230 aa)
FF38_03769Small nuclear ribonucleoprotein G. (76 aa)
FF38_03962Uncharacterized protein. (580 aa)
FF38_03969Uncharacterized protein. (766 aa)
FF38_06649Uncharacterized protein. (852 aa)
FF38_13958Uncharacterized protein. (325 aa)
FF38_13951Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (79 aa)
FF38_14399Uncharacterized protein. (941 aa)
FF38_14302Uncharacterized protein. (517 aa)
FF38_11696Uncharacterized protein. (547 aa)
FF38_06969UPF0468 protein. (201 aa)
FF38_07063YTH domain-containing protein. (292 aa)
FF38_12742Uncharacterized protein. (375 aa)
FF38_01073SGT1-like protein ecdysoneless. (702 aa)
FF38_12813Uncharacterized protein. (276 aa)
FF38_12427Putative interleukin enhancer-binding factor 2. (393 aa)
FF38_07060Uncharacterized protein. (1013 aa)
Your Current Organism:
Lucilia cuprina
NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly
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