13 items (Lucilia cuprina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FF38_03969	Uncharacterized protein. (766 aa)
	FF38_07435	Uncharacterized protein. (341 aa)
	FF38_03722	Protein suppressor of white apricot. (1036 aa)
	FF38_04820	Uncharacterized protein. (324 aa)
	FF38_10844	RRM domain-containing protein. (281 aa)
	FF38_06196	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (157 aa)
	FF38_09462	Uncharacterized protein. (342 aa)
	FF38_08338	RRM domain-containing protein. (122 aa)
	FF38_05239	Pre-mRNA-processing factor 39. (1193 aa)
	FF38_03058	Uncharacterized protein. (383 aa)
	FF38_14148	Poly(U)-binding-splicing factor half pint. (679 aa)
	FF38_00828	Pre-mRNA-splicing factor Slu7. (603 aa)
	FF38_03962	Uncharacterized protein. (580 aa)

Your Current Organism:

Lucilia cuprina

NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FF38_00828	FF38_06196	A0A0L0CD85	A0A0L0C6S4	Pre-mRNA-splicing factor Slu7.	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.	0.465
FF38_03058	FF38_05239	A0A0L0CCR6	A0A0L0CBV5	Uncharacterized protein.	Pre-mRNA-processing factor 39.	0.765
FF38_03058	FF38_06196	A0A0L0CCR6	A0A0L0C6S4	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.	0.784
FF38_03058	FF38_07435	A0A0L0CCR6	A0A0L0BVB7	Uncharacterized protein.	Uncharacterized protein.	0.525
FF38_04820	FF38_05239	A0A0L0C5S1	A0A0L0CBV5	Uncharacterized protein.	Pre-mRNA-processing factor 39.	0.765
FF38_04820	FF38_06196	A0A0L0C5S1	A0A0L0C6S4	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.	0.784
FF38_04820	FF38_07435	A0A0L0C5S1	A0A0L0BVB7	Uncharacterized protein.	Uncharacterized protein.	0.525
FF38_05239	FF38_03058	A0A0L0CBV5	A0A0L0CCR6	Pre-mRNA-processing factor 39.	Uncharacterized protein.	0.765
FF38_05239	FF38_04820	A0A0L0CBV5	A0A0L0C5S1	Pre-mRNA-processing factor 39.	Uncharacterized protein.	0.765
FF38_05239	FF38_06196	A0A0L0CBV5	A0A0L0C6S4	Pre-mRNA-processing factor 39.	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.	0.944
FF38_05239	FF38_07435	A0A0L0CBV5	A0A0L0BVB7	Pre-mRNA-processing factor 39.	Uncharacterized protein.	0.939
FF38_05239	FF38_09462	A0A0L0CBV5	A0A0L0C8H6	Pre-mRNA-processing factor 39.	Uncharacterized protein.	0.963
FF38_06196	FF38_00828	A0A0L0C6S4	A0A0L0CD85	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.	Pre-mRNA-splicing factor Slu7.	0.465
FF38_06196	FF38_03058	A0A0L0C6S4	A0A0L0CCR6	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.	Uncharacterized protein.	0.784
FF38_06196	FF38_04820	A0A0L0C6S4	A0A0L0C5S1	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.	Uncharacterized protein.	0.784
FF38_06196	FF38_05239	A0A0L0C6S4	A0A0L0CBV5	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.	Pre-mRNA-processing factor 39.	0.944
FF38_06196	FF38_07435	A0A0L0C6S4	A0A0L0BVB7	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.	Uncharacterized protein.	0.973
FF38_06196	FF38_09462	A0A0L0C6S4	A0A0L0C8H6	U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.	Uncharacterized protein.	0.938
FF38_07435	FF38_03058	A0A0L0BVB7	A0A0L0CCR6	Uncharacterized protein.	Uncharacterized protein.	0.525
FF38_07435	FF38_04820	A0A0L0BVB7	A0A0L0C5S1	Uncharacterized protein.	Uncharacterized protein.	0.525