30 items (Lucilia cuprina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FF38_01793	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family. (656 aa)
	FF38_00292	ARTD15_N domain-containing protein. (403 aa)
	FF38_12605	Transmembrane and TPR repeat-containing protein. (709 aa)
	FF38_14242	Heat shock 70 kDa protein cognate 4; Belongs to the heat shock protein 70 family. (652 aa)
	FF38_12907	PP1c_bdg domain-containing protein. (421 aa)
	FF38_02509	E3 ubiquitin-protein ligase HRD1. (705 aa)
	FF38_12440	Heat shock 70 kDa protein cognate 5; Belongs to the heat shock protein 70 family. (634 aa)
	FF38_00809	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family. (649 aa)
	FF38_00750	HATPase_c domain-containing protein. (692 aa)
	FF38_04862	Uncharacterized protein. (154 aa)
	FF38_13687	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (835 aa)
	FF38_11215	BZIP domain-containing protein. (549 aa)
	FF38_08562	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (966 aa)
	FF38_13296	BZIP domain-containing protein. (379 aa)
	FF38_12499	Uncharacterized protein. (535 aa)
	FF38_14110	Uncharacterized protein. (902 aa)
	FF38_09471	Uncharacterized protein. (384 aa)
	FF38_03543	BZIP domain-containing protein. (1083 aa)
	FF38_05244	Glucosylceramidase. (1080 aa)
	FF38_05246	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (250 aa)
	FF38_00742	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family. (573 aa)
	FF38_10674	Eukaryotic translation initiation factor 2-alpha kinase. (1268 aa)
	FF38_02796	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (273 aa)
	FF38_12811	Ubiquitin-like domain-containing protein. (502 aa)
	FF38_11092	Uncharacterized protein. (1092 aa)
	FF38_03767	Uncharacterized protein. (230 aa)
	FF38_07777	Putative Bax inhibitor 1; Belongs to the BI1 family. (240 aa)
	FF38_07779	Uncharacterized protein. (64 aa)
	FF38_03660	Heat shock 70 kDa protein cognate 2; Belongs to the heat shock protein 70 family. (636 aa)
	FF38_09145	Uncharacterized protein; Belongs to the heat shock protein 70 family. (508 aa)

Your Current Organism:

Lucilia cuprina

NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FF38_00742	FF38_00750	A0A0L0CCL0	A0A0L0BW03	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	HATPase_c domain-containing protein.	0.663
FF38_00742	FF38_00809	A0A0L0CCL0	A0A0L0BUG3	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	0.577
FF38_00742	FF38_01793	A0A0L0CCL0	A0A0L0C201	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	0.782
FF38_00742	FF38_03660	A0A0L0CCL0	A0A0L0CLM5	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	Heat shock 70 kDa protein cognate 2; Belongs to the heat shock protein 70 family.	0.577
FF38_00742	FF38_04862	A0A0L0CCL0	A0A0L0BXK0	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	Uncharacterized protein.	0.887
FF38_00742	FF38_09145	A0A0L0CCL0	A0A0L0CQM9	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.469
FF38_00742	FF38_12440	A0A0L0CCL0	A0A0L0BTH7	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	Heat shock 70 kDa protein cognate 5; Belongs to the heat shock protein 70 family.	0.981
FF38_00742	FF38_14242	A0A0L0CCL0	A0A0L0BPQ0	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	Heat shock 70 kDa protein cognate 4; Belongs to the heat shock protein 70 family.	0.577
FF38_00750	FF38_00742	A0A0L0BW03	A0A0L0CCL0	HATPase_c domain-containing protein.	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	0.663
FF38_00750	FF38_00809	A0A0L0BW03	A0A0L0BUG3	HATPase_c domain-containing protein.	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	0.835
FF38_00750	FF38_01793	A0A0L0BW03	A0A0L0C201	HATPase_c domain-containing protein.	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	0.772
FF38_00750	FF38_03660	A0A0L0BW03	A0A0L0CLM5	HATPase_c domain-containing protein.	Heat shock 70 kDa protein cognate 2; Belongs to the heat shock protein 70 family.	0.835
FF38_00750	FF38_03767	A0A0L0BW03	A0A0L0CHT5	HATPase_c domain-containing protein.	Uncharacterized protein.	0.651
FF38_00750	FF38_04862	A0A0L0BW03	A0A0L0BXK0	HATPase_c domain-containing protein.	Uncharacterized protein.	0.730
FF38_00750	FF38_09145	A0A0L0BW03	A0A0L0CQM9	HATPase_c domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.673
FF38_00750	FF38_12440	A0A0L0BW03	A0A0L0BTH7	HATPase_c domain-containing protein.	Heat shock 70 kDa protein cognate 5; Belongs to the heat shock protein 70 family.	0.758
FF38_00750	FF38_14242	A0A0L0BW03	A0A0L0BPQ0	HATPase_c domain-containing protein.	Heat shock 70 kDa protein cognate 4; Belongs to the heat shock protein 70 family.	0.835
FF38_00809	FF38_00742	A0A0L0BUG3	A0A0L0CCL0	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	0.577
FF38_00809	FF38_00750	A0A0L0BUG3	A0A0L0BW03	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	HATPase_c domain-containing protein.	0.835
FF38_00809	FF38_01793	A0A0L0BUG3	A0A0L0C201	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	0.747