17 items (Lucilia cuprina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FF38_02809	Uncharacterized protein. (249 aa)
	FF38_10369	Uncharacterized protein. (185 aa)
	FF38_03391	Uncharacterized protein. (386 aa)
	FF38_05040	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (558 aa)
	FF38_07063	YTH domain-containing protein. (292 aa)
	FF38_14302	Uncharacterized protein. (517 aa)
	FF38_03934	Splicing factor U2af 38 kDa subunit. (230 aa)
	FF38_00828	Pre-mRNA-splicing factor Slu7. (603 aa)
	FF38_02612	YTH domain-containing protein. (427 aa)
	FF38_12121	MPN domain-containing protein. (2396 aa)
	FF38_13580	YTH domain-containing protein. (777 aa)
	FF38_08577	U1 small nuclear ribonucleoprotein A. (216 aa)
	FF38_06146	Uncharacterized protein. (846 aa)
	FF38_04972	Uncharacterized protein. (425 aa)
	FF38_06288	CCHC-type domain-containing protein. (813 aa)
	FF38_05035	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (430 aa)
	FF38_09886	RRM domain-containing protein. (271 aa)

Your Current Organism:

Lucilia cuprina

NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FF38_00828	FF38_02809	A0A0L0CD85	A0A0L0C9C9	Pre-mRNA-splicing factor Slu7.	Uncharacterized protein.	0.919
FF38_00828	FF38_03934	A0A0L0CD85	A0A0L0CFQ2	Pre-mRNA-splicing factor Slu7.	Splicing factor U2af 38 kDa subunit.	0.771
FF38_00828	FF38_04972	A0A0L0CD85	A0A0L0CLW0	Pre-mRNA-splicing factor Slu7.	Uncharacterized protein.	0.943
FF38_00828	FF38_05035	A0A0L0CD85	A0A0L0CMK9	Pre-mRNA-splicing factor Slu7.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.698
FF38_00828	FF38_05040	A0A0L0CD85	A0A0L0CKD4	Pre-mRNA-splicing factor Slu7.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.835
FF38_00828	FF38_06288	A0A0L0CD85	A0A0L0C7U8	Pre-mRNA-splicing factor Slu7.	CCHC-type domain-containing protein.	0.429
FF38_00828	FF38_08577	A0A0L0CD85	A0A0L0C4S9	Pre-mRNA-splicing factor Slu7.	U1 small nuclear ribonucleoprotein A.	0.887
FF38_00828	FF38_10369	A0A0L0CD85	A0A0L0C0E0	Pre-mRNA-splicing factor Slu7.	Uncharacterized protein.	0.501
FF38_00828	FF38_12121	A0A0L0CD85	A0A0L0BS03	Pre-mRNA-splicing factor Slu7.	MPN domain-containing protein.	0.989
FF38_00828	FF38_14302	A0A0L0CD85	A0A0L0CGI0	Pre-mRNA-splicing factor Slu7.	Uncharacterized protein.	0.618
FF38_02612	FF38_07063	A0A0L0BZH0	A0A0L0CH23	YTH domain-containing protein.	YTH domain-containing protein.	0.775
FF38_02809	FF38_00828	A0A0L0C9C9	A0A0L0CD85	Uncharacterized protein.	Pre-mRNA-splicing factor Slu7.	0.919
FF38_02809	FF38_04972	A0A0L0C9C9	A0A0L0CLW0	Uncharacterized protein.	Uncharacterized protein.	0.815
FF38_02809	FF38_08577	A0A0L0C9C9	A0A0L0C4S9	Uncharacterized protein.	U1 small nuclear ribonucleoprotein A.	0.876
FF38_03391	FF38_08577	A0A0L0C2G3	A0A0L0C4S9	Uncharacterized protein.	U1 small nuclear ribonucleoprotein A.	0.853
FF38_03391	FF38_09886	A0A0L0C2G3	A0A0L0CM93	Uncharacterized protein.	RRM domain-containing protein.	0.703
FF38_03934	FF38_00828	A0A0L0CFQ2	A0A0L0CD85	Splicing factor U2af 38 kDa subunit.	Pre-mRNA-splicing factor Slu7.	0.771
FF38_03934	FF38_05035	A0A0L0CFQ2	A0A0L0CMK9	Splicing factor U2af 38 kDa subunit.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.997
FF38_03934	FF38_05040	A0A0L0CFQ2	A0A0L0CKD4	Splicing factor U2af 38 kDa subunit.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.999
FF38_03934	FF38_06288	A0A0L0CFQ2	A0A0L0C7U8	Splicing factor U2af 38 kDa subunit.	CCHC-type domain-containing protein.	0.737