104 items (Lucilia cuprina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FF38_12995	Uncharacterized protein. (333 aa)
	FF38_01869	U1 small nuclear ribonucleoprotein 70 kDa. (429 aa)
	FF38_00667	RNA-binding protein Rsf1. (220 aa)
	FF38_01625	Heterogeneous nuclear ribonucleoprotein 27C. (257 aa)
	FF38_02938	Heterogeneous nuclear ribonucleoprotein 27C. (186 aa)
	FF38_01657	C3H1-type domain-containing protein. (414 aa)
	FF38_03060	Protein crooked neck. (743 aa)
	FF38_14148	Poly(U)-binding-splicing factor half pint. (679 aa)
	FF38_03912	Putative methyltransferase-like protein 14; Belongs to the MT-A70-like family. (417 aa)
	FF38_07654	Uncharacterized protein. (1526 aa)
	FF38_02246	Helicase C-terminal domain-containing protein. (534 aa)
	FF38_11588	Helicase ATP-binding domain-containing protein. (541 aa)
	FF38_03934	Splicing factor U2af 38 kDa subunit. (230 aa)
	FF38_03962	Uncharacterized protein. (580 aa)
	FF38_03969	Uncharacterized protein. (766 aa)
	FF38_12765	Uncharacterized protein. (980 aa)
	FF38_11635	Protein held out wings. (381 aa)
	FF38_12762	DNA-binding protein modulo. (518 aa)
	FF38_08548	Uncharacterized protein. (905 aa)
	FF38_05239	Pre-mRNA-processing factor 39. (1193 aa)
	FF38_11568	Putative N6-adenosine-methyltransferase MT-A70-like protein; Belongs to the MT-A70-like family. (672 aa)
	FF38_06105	Uncharacterized protein. (388 aa)
	FF38_01387	Uncharacterized protein. (1180 aa)
	FF38_13149	Uncharacterized protein. (877 aa)
	FF38_00700	Uncharacterized protein. (586 aa)
	FF38_00279	Uncharacterized protein. (824 aa)
	FF38_08338	RRM domain-containing protein. (122 aa)
	FF38_09684	Uncharacterized protein. (468 aa)
	FF38_02890	ATP-dependent RNA helicase WM6. (455 aa)
	FF38_06288	CCHC-type domain-containing protein. (813 aa)
	FF38_03016	Uncharacterized protein. (789 aa)
	FF38_13159	Pre-mRNA-splicing regulator female-lethal(2)D. (585 aa)
	FF38_02648	Putative ATP-dependent RNA helicase Dbp45A; Belongs to the DEAD box helicase family. (538 aa)
	FF38_06146	Uncharacterized protein. (846 aa)
	FF38_10844	RRM domain-containing protein. (281 aa)
	FF38_03444	Histone chaperone asf1. (239 aa)
	FF38_01184	Uncharacterized protein. (963 aa)
	FF38_07089	RRM domain-containing protein. (196 aa)
	FF38_12341	Uncharacterized protein. (6440 aa)
	FF38_08577	U1 small nuclear ribonucleoprotein A. (216 aa)
	FF38_00844	Poly(ADP-ribose) glycohydrolase. (711 aa)
	FF38_13396	Protein virilizer. (640 aa)
	FF38_10956	Uncharacterized protein. (923 aa)
	FF38_13012	Uncharacterized protein. (2376 aa)
	FF38_11356	Helicase domino. (1269 aa)
	FF38_01368	RING-type domain-containing protein. (442 aa)
	FF38_10032	Helicase domino. (2495 aa)
	FF38_09508	RRM domain-containing protein. (179 aa)
	FF38_03391	Uncharacterized protein. (386 aa)
	FF38_09504	RRM domain-containing protein. (148 aa)
	FF38_00838	Uncharacterized protein. (577 aa)
	FF38_05385	RNA-binding protein 1. (148 aa)
	FF38_11837	ATP-dependent RNA helicase p62; Belongs to the DEAD box helicase family. (753 aa)
	FF38_11853	RNA-binding protein squid. (319 aa)
	FF38_08155	Uncharacterized protein. (1052 aa)
	FF38_12878	Zinc finger protein on ecdysone puffs. (180 aa)
	FF38_07878	Serine-arginine protein 55. (347 aa)
	FF38_10451	Zinc finger protein on ecdysone puffs. (489 aa)
	FF38_02612	YTH domain-containing protein. (427 aa)
	FF38_11937	Serine/threonine-protein kinase Doa. (4572 aa)
	FF38_11849	Heterogeneous nuclear ribonucleoprotein A1. (393 aa)
	FF38_11846	Ribonucleoprotein RB97D. (393 aa)
	FF38_07866	Heterogeneous nuclear ribonucleoprotein 87F. (387 aa)
	FF38_14169	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
	FF38_04267	ATP-dependent RNA helicase p62; Belongs to the DEAD box helicase family. (593 aa)
	FF38_14185	Uncharacterized protein; Belongs to the DEAD box helicase family. (691 aa)
	FF38_14051	RING-type domain-containing protein. (555 aa)
	FF38_02786	Helicase domino. (463 aa)
	FF38_05625	Uncharacterized protein. (801 aa)
	FF38_01301	Uncharacterized protein. (1199 aa)
	FF38_13822	Helicase ATP-binding domain-containing protein. (704 aa)
	FF38_13728	Uncharacterized protein. (1296 aa)
	FF38_02933	Uncharacterized protein. (157 aa)
	FF38_12156	KH domain-containing protein. (406 aa)
	FF38_11764	COMM domain-containing protein. (210 aa)
	FF38_06445	Helicase domino. (461 aa)
	FF38_07063	YTH domain-containing protein. (292 aa)
	FF38_11092	Uncharacterized protein. (1092 aa)
	FF38_10636	Putative U5 small nuclear ribonucleoprotein 200 kDa helicase. (2142 aa)
	FF38_12465	KH domain-containing protein. (404 aa)
	FF38_12461	KH domain-containing protein. (665 aa)
	FF38_14024	Uncharacterized protein. (469 aa)
	FF38_12420	Uncharacterized protein. (2472 aa)
	FF38_13117	Uncharacterized protein. (607 aa)
	FF38_05040	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (558 aa)
	FF38_00018	Uncharacterized protein. (1202 aa)
	FF38_07777	Putative Bax inhibitor 1; Belongs to the BI1 family. (240 aa)
	FF38_04972	Uncharacterized protein. (425 aa)
	FF38_09886	RRM domain-containing protein. (271 aa)
	FF38_07489	PWI domain-containing protein. (1239 aa)
	FF38_02081	Tudor domain-containing protein. (241 aa)
	FF38_07773	Cleavage and polyadenylation specificity factor subunit. (686 aa)
	FF38_01987	Uncharacterized protein. (977 aa)
	FF38_10893	Uncharacterized protein. (408 aa)
	FF38_05900	RRM domain-containing protein. (720 aa)
	FF38_09357	Uncharacterized protein. (767 aa)
	FF38_09148	Uncharacterized protein. (996 aa)
	FF38_01975	Uncharacterized protein. (783 aa)
	FF38_09367	CID domain-containing protein. (811 aa)
	FF38_02593	Sm domain-containing protein. (271 aa)
	FF38_07551	DUF2040 domain-containing protein. (399 aa)
	FF38_00403	Uncharacterized protein. (502 aa)
	FF38_13439	Helicase ATP-binding domain-containing protein. (755 aa)
	FF38_12049	VIR_N domain-containing protein. (1228 aa)

Your Current Organism:

Lucilia cuprina

NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FF38_00279	FF38_01869	A0A0L0C9W9	A0A0L0BSM1	Uncharacterized protein.	U1 small nuclear ribonucleoprotein 70 kDa.	0.477
FF38_00279	FF38_02890	A0A0L0C9W9	A0A0L0C8Z1	Uncharacterized protein.	ATP-dependent RNA helicase WM6.	0.640
FF38_00279	FF38_03934	A0A0L0C9W9	A0A0L0CFQ2	Uncharacterized protein.	Splicing factor U2af 38 kDa subunit.	0.526
FF38_00279	FF38_05040	A0A0L0C9W9	A0A0L0CKD4	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.615
FF38_00279	FF38_07089	A0A0L0C9W9	A0A0L0C5X3	Uncharacterized protein.	RRM domain-containing protein.	0.530
FF38_00279	FF38_07489	A0A0L0C9W9	A0A0L0CM94	Uncharacterized protein.	PWI domain-containing protein.	0.538
FF38_00279	FF38_07773	A0A0L0C9W9	A0A0L0CND3	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit.	0.659
FF38_00279	FF38_07878	A0A0L0C9W9	A0A0L0C0C8	Uncharacterized protein.	Serine-arginine protein 55.	0.587
FF38_00279	FF38_08155	A0A0L0C9W9	A0A0L0C0I1	Uncharacterized protein.	Uncharacterized protein.	0.535
FF38_00279	FF38_09148	A0A0L0C9W9	A0A0L0CQM4	Uncharacterized protein.	Uncharacterized protein.	0.512
FF38_00279	FF38_09367	A0A0L0C9W9	A0A0L0CQZ0	Uncharacterized protein.	CID domain-containing protein.	0.920
FF38_00279	FF38_14024	A0A0L0C9W9	A0A0L0CJB3	Uncharacterized protein.	Uncharacterized protein.	0.455
FF38_00403	FF38_00667	A0A0L0BMU7	A0A0L0BQ10	Uncharacterized protein.	RNA-binding protein Rsf1.	0.642
FF38_00403	FF38_00700	A0A0L0BMU7	A0A0L0C9Y5	Uncharacterized protein.	Uncharacterized protein.	0.422
FF38_00403	FF38_01869	A0A0L0BMU7	A0A0L0BSM1	Uncharacterized protein.	U1 small nuclear ribonucleoprotein 70 kDa.	0.504
FF38_00403	FF38_02933	A0A0L0BMU7	A0A0L0BT18	Uncharacterized protein.	Uncharacterized protein.	0.567
FF38_00403	FF38_05385	A0A0L0BMU7	A0A0L0C1M4	Uncharacterized protein.	RNA-binding protein 1.	0.565
FF38_00403	FF38_07089	A0A0L0BMU7	A0A0L0C5X3	Uncharacterized protein.	RRM domain-containing protein.	0.539
FF38_00403	FF38_08577	A0A0L0BMU7	A0A0L0C4S9	Uncharacterized protein.	U1 small nuclear ribonucleoprotein A.	0.538
FF38_00403	FF38_14024	A0A0L0BMU7	A0A0L0CJB3	Uncharacterized protein.	Uncharacterized protein.	0.765