13 items (Lucilia cuprina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FF38_03660	Heat shock 70 kDa protein cognate 2; Belongs to the heat shock protein 70 family. (636 aa)
	FF38_02796	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (273 aa)
	FF38_10663	Uncharacterized protein. (217 aa)
	FF38_05246	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (250 aa)
	FF38_01793	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family. (656 aa)
	FF38_04862	Uncharacterized protein. (154 aa)
	FF38_04635	Uncharacterized protein. (498 aa)
	FF38_00809	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family. (649 aa)
	FF38_12440	Heat shock 70 kDa protein cognate 5; Belongs to the heat shock protein 70 family. (634 aa)
	FF38_14242	Heat shock 70 kDa protein cognate 4; Belongs to the heat shock protein 70 family. (652 aa)
	FF38_14098	J domain-containing protein. (439 aa)
	FF38_09145	Uncharacterized protein; Belongs to the heat shock protein 70 family. (508 aa)
	FF38_05962	Ubiquitin-like domain-containing protein. (1199 aa)

Your Current Organism:

Lucilia cuprina

NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FF38_00809	FF38_01793	A0A0L0BUG3	A0A0L0C201	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	0.747
FF38_00809	FF38_03660	A0A0L0BUG3	A0A0L0CLM5	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	Heat shock 70 kDa protein cognate 2; Belongs to the heat shock protein 70 family.	0.913
FF38_00809	FF38_04635	A0A0L0BUG3	A0A0L0BWH9	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.514
FF38_00809	FF38_04862	A0A0L0BUG3	A0A0L0BXK0	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.538
FF38_00809	FF38_12440	A0A0L0BUG3	A0A0L0BTH7	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	Heat shock 70 kDa protein cognate 5; Belongs to the heat shock protein 70 family.	0.597
FF38_00809	FF38_14098	A0A0L0BUG3	A0A0L0BNI4	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	J domain-containing protein.	0.532
FF38_00809	FF38_14242	A0A0L0BUG3	A0A0L0BPQ0	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	Heat shock 70 kDa protein cognate 4; Belongs to the heat shock protein 70 family.	0.905
FF38_01793	FF38_00809	A0A0L0C201	A0A0L0BUG3	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	0.747
FF38_01793	FF38_02796	A0A0L0C201	A0A0L0CE93	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.898
FF38_01793	FF38_03660	A0A0L0C201	A0A0L0CLM5	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	Heat shock 70 kDa protein cognate 2; Belongs to the heat shock protein 70 family.	0.748
FF38_01793	FF38_04635	A0A0L0C201	A0A0L0BWH9	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.826
FF38_01793	FF38_04862	A0A0L0C201	A0A0L0BXK0	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.701
FF38_01793	FF38_05246	A0A0L0C201	A0A0L0CC31	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.942
FF38_01793	FF38_10663	A0A0L0C201	A0A0L0CDT9	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.512
FF38_01793	FF38_12440	A0A0L0C201	A0A0L0BTH7	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	Heat shock 70 kDa protein cognate 5; Belongs to the heat shock protein 70 family.	0.784
FF38_01793	FF38_14098	A0A0L0C201	A0A0L0BNI4	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	J domain-containing protein.	0.747
FF38_01793	FF38_14242	A0A0L0C201	A0A0L0BPQ0	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	Heat shock 70 kDa protein cognate 4; Belongs to the heat shock protein 70 family.	0.747
FF38_02796	FF38_01793	A0A0L0CE93	A0A0L0C201	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Heat shock 70 kDa protein cognate 3; Belongs to the heat shock protein 70 family.	0.898
FF38_02796	FF38_05246	A0A0L0CE93	A0A0L0CC31	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.997
FF38_03660	FF38_00809	A0A0L0CLM5	A0A0L0BUG3	Heat shock 70 kDa protein cognate 2; Belongs to the heat shock protein 70 family.	Heat shock 70 kDa protein cognate 1; Belongs to the heat shock protein 70 family.	0.913