(14 nodes) Fatty acid elongation network (Rhodotorula taiwanensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BMF94_1578	Uncharacterized protein. (412 aa)
	BMF94_1066	4HBT domain-containing protein. (358 aa)
	BMF94_5437	S5A_REDUCTASE domain-containing protein. (345 aa)
	BMF94_5161	Uncharacterized protein. (432 aa)
	BMF94_5058	BZIP domain-containing protein. (578 aa)
	BMF94_4976	Elongation of fatty acids protein. (290 aa)
	BMF94_4684	Putative Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (290 aa)
	BMF94_4664	BZIP domain-containing protein. (580 aa)
	BMF94_4430	Putative Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
	BMF94_3921	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...] (294 aa)
	BMF94_3837	Elongation of fatty acids protein. (334 aa)
	BMF94_3024	Uncharacterized protein. (355 aa)
	BMF94_2122	PKS_ER domain-containing protein. (397 aa)
	BMF94_1965	Uncharacterized protein. (333 aa)

Your Current Organism:

Rhodotorula taiwanensis

NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMF94_1578	BMF94_2122	A0A2S5BF04	A0A2S5BDK5	Uncharacterized protein.	PKS_ER domain-containing protein.	0.761
BMF94_1578	BMF94_4684	A0A2S5BF04	A0A2S5B6H5	Uncharacterized protein.	Putative Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.473
BMF94_1965	BMF94_4430	A0A2S5BDZ3	A0A2S5B748	Uncharacterized protein.	Putative Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.978
BMF94_1965	BMF94_4684	A0A2S5BDZ3	A0A2S5B6H5	Uncharacterized protein.	Putative Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.995
BMF94_2122	BMF94_1578	A0A2S5BDK5	A0A2S5BF04	PKS_ER domain-containing protein.	Uncharacterized protein.	0.761
BMF94_2122	BMF94_4430	A0A2S5BDK5	A0A2S5B748	PKS_ER domain-containing protein.	Putative Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.897
BMF94_2122	BMF94_4684	A0A2S5BDK5	A0A2S5B6H5	PKS_ER domain-containing protein.	Putative Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.921
BMF94_3024	BMF94_3837	A0A2S5BAR3	A0A2S5B8P4	Uncharacterized protein.	Elongation of fatty acids protein.	0.568
BMF94_3024	BMF94_3921	A0A2S5BAR3	A0A2S5B8I1	Uncharacterized protein.	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]	0.909
BMF94_3024	BMF94_4430	A0A2S5BAR3	A0A2S5B748	Uncharacterized protein.	Putative Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.574
BMF94_3024	BMF94_4664	A0A2S5BAR3	A0A2S5B6L6	Uncharacterized protein.	BZIP domain-containing protein.	0.848
BMF94_3024	BMF94_4684	A0A2S5BAR3	A0A2S5B6H5	Uncharacterized protein.	Putative Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.626
BMF94_3024	BMF94_4976	A0A2S5BAR3	A0A2S5B5B7	Uncharacterized protein.	Elongation of fatty acids protein.	0.940
BMF94_3024	BMF94_5058	A0A2S5BAR3	A0A2S5B562	Uncharacterized protein.	BZIP domain-containing protein.	0.826
BMF94_3024	BMF94_5437	A0A2S5BAR3	A0A2S5B412	Uncharacterized protein.	S5A_REDUCTASE domain-containing protein.	0.987
BMF94_3837	BMF94_3024	A0A2S5B8P4	A0A2S5BAR3	Elongation of fatty acids protein.	Uncharacterized protein.	0.568
BMF94_3837	BMF94_3921	A0A2S5B8P4	A0A2S5B8I1	Elongation of fatty acids protein.	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]	0.565
BMF94_3837	BMF94_4664	A0A2S5B8P4	A0A2S5B6L6	Elongation of fatty acids protein.	BZIP domain-containing protein.	0.565
BMF94_3837	BMF94_4976	A0A2S5B8P4	A0A2S5B5B7	Elongation of fatty acids protein.	Elongation of fatty acids protein.	0.798
BMF94_3837	BMF94_5058	A0A2S5B8P4	A0A2S5B562	Elongation of fatty acids protein.	BZIP domain-containing protein.	0.565