STRINGSTRING
rimM rimM trmD trmD EGX67879.1 EGX67879.1 glyQ glyQ glyS glyS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rimM16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (171 aa)
trmDtRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (255 aa)
EGX67879.1Signal peptidase I; Belongs to the peptidase S26 family. (185 aa)
glyQglycyl-tRNA synthetase alpha subunit. (297 aa)
glySglycyl-tRNA synthetase. (694 aa)
Your Current Organism:
Collinsella tanakaei
NCBI taxonomy Id: 742742
Other names: C. tanakaei YIT 12063, Collinsella sp. YIT 12063, Collinsella tanakaei JCM 16071, Collinsella tanakaei YIT 12063, Collinsella tanakaei str. YIT 12063, Collinsella tanakaei strain YIT 12063
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