STRINGSTRING
ADV25976.1 ADV25976.1 ADV25999.1 ADV25999.1 ADV26152.1 ADV26152.1 ADV26154.1 ADV26154.1 ADV26155.1 ADV26155.1 ADV26156.1 ADV26156.1 ADV26157.1 ADV26157.1 ADV26158.1 ADV26158.1 ADV26159.1 ADV26159.1 ADV26171.1 ADV26171.1 ADV26294.1 ADV26294.1 ADV26319.1 ADV26319.1 ADV26435.1 ADV26435.1 ADV26733.1 ADV26733.1 ADV26814.1 ADV26814.1 ADV26815.1 ADV26815.1 ADV26890.1 ADV26890.1 ADV26987.1 ADV26987.1 ADV26988.1 ADV26988.1 ADV26989.1 ADV26989.1 ADV27053.1 ADV27053.1 ADV27125.1 ADV27125.1 ADV27126.1 ADV27126.1 ADV27127.1 ADV27127.1 cmk cmk der der ADV27397.1 ADV27397.1 ADV27398.1 ADV27398.1 ADV27515.1 ADV27515.1 ADV27555.1 ADV27555.1 azoR azoR smc smc ADV27737.1 ADV27737.1 ADV27738.1 ADV27738.1 ADV27739.1 ADV27739.1 ADV27747.1 ADV27747.1 ADV27774.1 ADV27774.1 ADV27904.1 ADV27904.1 ADV27905.1 ADV27905.1 ADV27906.1 ADV27906.1 potA potA ADV27908.1 ADV27908.1 ADV27909.1 ADV27909.1 ADV27910.1 ADV27910.1 ADV27911.1 ADV27911.1 ADV27912.1 ADV27912.1 ADV27913.1 ADV27913.1 ADV27914.1 ADV27914.1 ADV27916.1 ADV27916.1 ADV27945.1 ADV27945.1 ADV27946.1 ADV27946.1 ADV27947.1 ADV27947.1 ADV27949.1 ADV27949.1 ADV28049.1 ADV28049.1 ADV28437.1 ADV28437.1 ADV28438.1 ADV28438.1 ADV28863.1 ADV28863.1 ADV28864.1 ADV28864.1 ADV28865.1 ADV28865.1 ADV28866.1 ADV28866.1 ADV28867.1 ADV28867.1 ADV28868.1 ADV28868.1 ADV28869.1 ADV28869.1 ADV28888.1 ADV28888.1 ADV28889.1 ADV28889.1 aceK aceK ADV28891.1 ADV28891.1 ADV28892.1 ADV28892.1 ADV28893.1 ADV28893.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADV25976.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smt:Smal_3209 transcriptional regulator CysB-like protein. (352 aa)
ADV25999.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: xac:XAC0255 transcriptional regulator. (334 aa)
ADV26152.1KEGG: xcv:XCV3810 AsnC family leucine-responsive regulatory protein; PFAM: Transcription regulator AsnC-type-like; regulatory protein MarR; SMART: Transcription regulator AsnC-type. (167 aa)
ADV26154.1Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (356 aa)
ADV26155.1KEGG: rxy:Rxyl_2426 oxidoreductase, molybdopterin binding protein. (128 aa)
ADV26156.1PFAM: amidohydrolase; KEGG: gvi:glr3517 hypothetical protein. (449 aa)
ADV26157.1rRNA (guanine-N(2)-)-methyltransferase; KEGG: xca:xccb100_3825 ribosomal RNA small subunit methyltransferase C; PFAM: methyltransferase small; Belongs to the methyltransferase superfamily. (358 aa)
ADV26158.1PFAM: pseudouridine synthase; KEGG: smt:Smal_0451 pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (236 aa)
ADV26159.1KEGG: xca:xccb100_3823 HAD superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. (234 aa)
ADV26171.1PFAM: OmpW family protein; KEGG: xac:XAC3664 outer membrane protein. (209 aa)
ADV26294.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: xca:xccb100_0865 transcriptional regulator, LysR family. (288 aa)
ADV26319.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: xac:XAC3339 transcriptional regulator CysB-like protein. (356 aa)
ADV26435.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smt:Smal_3137 transcriptional regulator, LysR family. (291 aa)
ADV26733.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: xal:XALc_0939 putative trancriptional regulator, LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (316 aa)
ADV26814.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ank:AnaeK_3357 short-chain dehydrogenase/reductase SDR. (254 aa)
ADV26815.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ajs:Ajs_0158 LysR family transcriptional regulator. (304 aa)
ADV26890.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: xca:xccb100_2513 transcriptional regulator, LysR family. (323 aa)
ADV26987.1Hypothetical protein; KEGG: reu:Reut_B4231 glycoside hydrolase family protein. (103 aa)
ADV26988.1Helix-turn-helix domain protein; KEGG: xfa:XF0696 phage-related repressor protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (140 aa)
ADV26989.1KEGG: xfa:XF0697 hypothetical protein. (68 aa)
ADV27053.1KEGG: xcv:XCV2697 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; regulatory protein MarR; SMART: Transcription regulator AsnC-type. (143 aa)
ADV27125.1RNA-binding S4 domain protein; KEGG: xal:XALc_1309 probable ribosomal large subunit pseudouridine synthase B (rRNA pseudouridylate synthase b) protein; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; Belongs to the pseudouridine synthase RsuA family. (509 aa)
ADV27126.1Chromosome segregation and condensation protein, ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (274 aa)
ADV27127.1Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (305 aa)
cmkTIGRFAM: cytidylate kinase; KEGG: smt:Smal_1645 cytidylate kinase; PFAM: cytidylate kinase region. (225 aa)
derRibosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (465 aa)
ADV27397.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xcb:XC_0324 short chain dehydrogenase; Validated; region: PRK08264; PRK08264; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (255 aa)
ADV27398.1KEGG: bxe:Bxe_C1385 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (329 aa)
ADV27515.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: xac:XAC1480 transcriptional regulator. (340 aa)
ADV27555.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smt:Smal_2532 transcriptional regulator, LysR family. (329 aa)
azoRNAD(P)H dehydrogenase (quinone); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. (195 aa)
smcChromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1178 aa)
ADV27737.1PFAM: protein of unknown function DUF6 transmembrane; KEGG: xac:XAC2790 hypothetical protein. (302 aa)
ADV27738.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: xac:XAC2791 transcriptional regulator. (312 aa)
ADV27739.1KEGG: xca:xccb100_1531 hypothetical protein. (97 aa)
ADV27747.1KEGG: smt:Smal_1228 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; Belongs to the pseudouridine synthase RsuA family. (242 aa)
ADV27774.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfl:PFL_0038 transcriptional regulator TrpI. (295 aa)
ADV27904.1PFAM: Pirin domain protein; KEGG: smt:Smal_2986 pirin domain protein; Belongs to the pirin family. (286 aa)
ADV27905.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xca:xccb100_1835 putrescine ABC transporter permease. (281 aa)
ADV27906.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xcv:XCV2649 putrescine ABC transporter permease. (303 aa)
potASpermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (379 aa)
ADV27908.1Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (375 aa)
ADV27909.1Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (374 aa)
ADV27910.1PFAM: aminotransferase class-III; KEGG: xcv:XCV2655 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (454 aa)
ADV27911.1Glutamate--putrescine ligase; KEGG: xal:XALc_2094 putative glutamine synthetase protein; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp. (463 aa)
ADV27912.1Gamma-glutamyl-gamma-aminobutyrate hydrolase; KEGG: xac:XAC2479 glutamine amidotransferase; PFAM: peptidase C26. (262 aa)
ADV27913.1Glutamate--putrescine ligase; KEGG: xal:XALc_2096 putative glutamine synthase protein; PFAM: glutamine synthetase catalytic region. (460 aa)
ADV27914.1PFAM: FAD dependent oxidoreductase; KEGG: xal:XALc_2097 putative oxidoreductase oxidoreductase protein. (425 aa)
ADV27916.1Hemerythrin-like metal-binding protein; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. (161 aa)
ADV27945.1PFAM: Aldehyde Dehydrogenase; KEGG: xal:XALc_2105 putative aldehyde dehydrogenase protein; Belongs to the aldehyde dehydrogenase family. (500 aa)
ADV27946.1Hypothetical protein; KEGG: enc:ECL_00959 chloride channel protein. (108 aa)
ADV27947.1Transcriptional regulator, XRE family; KEGG: cvi:CV_2021 transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (182 aa)
ADV27949.1TIGRFAM: alanine dehydrogenase; KEGG: xal:XALc_1972 probable alanine dehydrogenase oxidoreductase protein; PFAM: alanine dehydrogenase/PNT domain protein. (372 aa)
ADV28049.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pmy:Pmen_2017 LysR family transcriptional regulator. (302 aa)
ADV28437.1RNA-binding S4 domain protein; KEGG: pap:PSPA7_4261 hypothetical protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein. (270 aa)
ADV28438.1RIO-like kinase; KEGG: xca:xccb100_0400 non-specific serine/threonine protein kinase; PFAM: RIO-like kinase; SMART: protein of unknown function RIO1. (285 aa)
ADV28863.1KEGG: sti:Sthe_1387 polyprenyl synthetase. (72 aa)
ADV28864.1PFAM: restriction endonuclease; KEGG: cph:Cpha266_1614 restriction endonuclease. (571 aa)
ADV28865.1Neprilysin; KEGG: ccs:CCNA_03619 zinc metalloprotease; PFAM: peptidase M13; Peptidase M13, neprilysin-like. (718 aa)
ADV28866.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sme:SMa2341 transcriptional regulator, LysR family. (301 aa)
ADV28867.1KEGG: pmy:Pmen_2897 hypothetical protein. (156 aa)
ADV28868.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psb:Psyr_0194 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)
ADV28869.1KEGG: pmy:Pmen_2898 ketosteroid isomerase-like protein. (166 aa)
ADV28888.1KEGG: nve:NEMVE_v1g222486 hypothetical protein. (78 aa)
ADV28889.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smt:Smal_3637 transcriptional regulator, LysR family. (297 aa)
aceK(Isocitrate dehydrogenase (NADP(+))) kinase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. (569 aa)
ADV28891.1KEGG: xca:xccb100_0296 exported methyltransferase. (284 aa)
ADV28892.1PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ddr:Deide_3p00234 putative antibiotic biosynthesis monooxygenase. (128 aa)
ADV28893.1PFAM: pseudouridine synthase; KEGG: smt:Smal_3888 pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (206 aa)
Your Current Organism:
Pseudoxanthomonas suwonensis 111
NCBI taxonomy Id: 743721
Other names: P. suwonensis 11-1, Pseudoxanthomonas suwonensis 11-1, Pseudoxanthomonas suwonensis str. 11-1, Pseudoxanthomonas suwonensis strain 11-1
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