STRINGSTRING
ADV26022.1 ADV26022.1 nth nth ADV27770.1 ADV27770.1 ADV27771.1 ADV27771.1 ADV27926.1 ADV27926.1 ADV27979.1 ADV27979.1 ADV28672.1 ADV28672.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADV26022.1TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: xca:xccb100_4030 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase. (270 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (263 aa)
ADV27770.1KEGG: smt:Smal_1219 transcriptional regulator, AraC family; PFAM: Ada metal-binding domain-containing protein; helix-turn-helix- domain containing protein AraC type; AlkA domain protein; HhH-GPD family protein; SMART: Helix-turn-helix, AraC domain; HhH-GPD family protein. (510 aa)
ADV27771.1methylated-DNA/protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (177 aa)
ADV27926.1KEGG: sml:Smlt2636 putative exodeoxyribonuclease III protein; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase. (267 aa)
ADV27979.1HhH-GPD family protein; KEGG: xcv:XCV1264 DNA-3-methyladenine glycosylase; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein. (226 aa)
ADV28672.1Exodeoxyribonuclease III; KEGG: sml:Smlt4619 putative endonuclease/exonuclease/phosphatase family protein; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase. (256 aa)
Your Current Organism:
Pseudoxanthomonas suwonensis 111
NCBI taxonomy Id: 743721
Other names: P. suwonensis 11-1, Pseudoxanthomonas suwonensis 11-1, Pseudoxanthomonas suwonensis str. 11-1, Pseudoxanthomonas suwonensis strain 11-1
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