(5 nodes) YjgF/YER057c/UK114 family network (Sphingobacterium sp. 21)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ADZ77726.1	KEGG: chu:CHU_3374 endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP. (126 aa)
	ADZ77410.1	PFAM: Endoribonuclease L-PSP; KEGG: reu:Reut_C6129 endoribonuclease L-PSP. (140 aa)
	ADZ80859.1	PFAM: Endoribonuclease L-PSP; KEGG: cti:RALTA_B2245 hypothetical protein. (153 aa)
	ADZ80754.1	PFAM: Endoribonuclease L-PSP; KEGG: dfe:Dfer_1772 endoribonuclease L-PSP. (130 aa)
	ADZ79505.1	PFAM: Endoribonuclease L-PSP; KEGG: sli:Slin_3967 endoribonuclease L-PSP. (151 aa)

Your Current Organism:

Sphingobacterium sp. 21

NCBI taxonomy Id: 743722
Other names: S. sp. 21

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADZ77410.1	ADZ79505.1	Sph21_0834	Sph21_2959	PFAM: Endoribonuclease L-PSP; KEGG: reu:Reut_C6129 endoribonuclease L-PSP.	PFAM: Endoribonuclease L-PSP; KEGG: sli:Slin_3967 endoribonuclease L-PSP.	0.764
ADZ79505.1	ADZ77410.1	Sph21_2959	Sph21_0834	PFAM: Endoribonuclease L-PSP; KEGG: sli:Slin_3967 endoribonuclease L-PSP.	PFAM: Endoribonuclease L-PSP; KEGG: reu:Reut_C6129 endoribonuclease L-PSP.	0.764
ADZ79505.1	ADZ80859.1	Sph21_2959	Sph21_4337	PFAM: Endoribonuclease L-PSP; KEGG: sli:Slin_3967 endoribonuclease L-PSP.	PFAM: Endoribonuclease L-PSP; KEGG: cti:RALTA_B2245 hypothetical protein.	0.763
ADZ80859.1	ADZ79505.1	Sph21_4337	Sph21_2959	PFAM: Endoribonuclease L-PSP; KEGG: cti:RALTA_B2245 hypothetical protein.	PFAM: Endoribonuclease L-PSP; KEGG: sli:Slin_3967 endoribonuclease L-PSP.	0.763