(19 nodes) Other glycan degradation network (Fomitopsis pinicola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S8FCX2_FOMPI	Uncharacterized protein. (696 aa)
	S8DVA9_FOMPI	Glyco_hydro_30 domain-containing protein; Belongs to the glycosyl hydrolase 30 family. (499 aa)
	S8DTS6_FOMPI	BetaGal_dom2 domain-containing protein. (1012 aa)
	S8E0Q1_FOMPI	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (292 aa)
	S8DQ91_FOMPI	Alpha-mann_mid domain-containing protein. (1120 aa)
	S8DTX9_FOMPI	Uncharacterized protein. (943 aa)
	S8E5X5_FOMPI	Glyco_hydro_30 domain-containing protein; Belongs to the glycosyl hydrolase 30 family. (474 aa)
	S8E6K6_FOMPI	Beta-hexosaminidase. (557 aa)
	S8E724_FOMPI	Glyco_hydro_30 domain-containing protein; Belongs to the glycosyl hydrolase 30 family. (474 aa)
	S8E8V7_FOMPI	Uncharacterized protein. (289 aa)
	S8E8Y5_FOMPI	Glyco_hydro_85 domain-containing protein. (750 aa)
	S8EB00_FOMPI	Glyco_hydro_30 domain-containing protein; Belongs to the glycosyl hydrolase 30 family. (489 aa)
	S8EE03_FOMPI	Beta-hexosaminidase. (560 aa)
	S8EJV5_FOMPI	Uncharacterized protein. (872 aa)
	S8EYH2_FOMPI	BetaGal_dom2 domain-containing protein. (1015 aa)
	S8F5T1_FOMPI	Uncharacterized protein. (908 aa)
	S8F6W3_FOMPI	Uncharacterized protein. (881 aa)
	S8F960_FOMPI	Glyco_hyd_65N_2 domain-containing protein. (842 aa)
	S8FBE8_FOMPI	Beta-hexosaminidase. (568 aa)

Your Current Organism:

Fomitopsis pinicola

NCBI taxonomy Id: 743788
Other names: F. pinicola FP-58527 SS1, Fomitopsis pinicola FP-58527, Fomitopsis pinicola FP-58527 SS1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
S8DQ91_FOMPI	S8E8V7_FOMPI	S8DQ91	S8E8V7	Alpha-mann_mid domain-containing protein.	Uncharacterized protein.	0.841
S8DQ91_FOMPI	S8E8Y5_FOMPI	S8DQ91	S8E8Y5	Alpha-mann_mid domain-containing protein.	Glyco_hydro_85 domain-containing protein.	0.739
S8DTS6_FOMPI	S8DTX9_FOMPI	S8DTS6	S8DTX9	BetaGal_dom2 domain-containing protein.	Uncharacterized protein.	0.562
S8DTS6_FOMPI	S8DVA9_FOMPI	S8DTS6	S8DVA9	BetaGal_dom2 domain-containing protein.	Glyco_hydro_30 domain-containing protein; Belongs to the glycosyl hydrolase 30 family.	0.557
S8DTS6_FOMPI	S8E5X5_FOMPI	S8DTS6	S8E5X5	BetaGal_dom2 domain-containing protein.	Glyco_hydro_30 domain-containing protein; Belongs to the glycosyl hydrolase 30 family.	0.557
S8DTS6_FOMPI	S8E6K6_FOMPI	S8DTS6	S8E6K6	BetaGal_dom2 domain-containing protein.	Beta-hexosaminidase.	0.578
S8DTS6_FOMPI	S8E724_FOMPI	S8DTS6	S8E724	BetaGal_dom2 domain-containing protein.	Glyco_hydro_30 domain-containing protein; Belongs to the glycosyl hydrolase 30 family.	0.557
S8DTS6_FOMPI	S8EB00_FOMPI	S8DTS6	S8EB00	BetaGal_dom2 domain-containing protein.	Glyco_hydro_30 domain-containing protein; Belongs to the glycosyl hydrolase 30 family.	0.557
S8DTS6_FOMPI	S8EE03_FOMPI	S8DTS6	S8EE03	BetaGal_dom2 domain-containing protein.	Beta-hexosaminidase.	0.578
S8DTS6_FOMPI	S8EJV5_FOMPI	S8DTS6	S8EJV5	BetaGal_dom2 domain-containing protein.	Uncharacterized protein.	0.562
S8DTS6_FOMPI	S8F5T1_FOMPI	S8DTS6	S8F5T1	BetaGal_dom2 domain-containing protein.	Uncharacterized protein.	0.562
S8DTS6_FOMPI	S8F6W3_FOMPI	S8DTS6	S8F6W3	BetaGal_dom2 domain-containing protein.	Uncharacterized protein.	0.562
S8DTS6_FOMPI	S8FBE8_FOMPI	S8DTS6	S8FBE8	BetaGal_dom2 domain-containing protein.	Beta-hexosaminidase.	0.578
S8DTS6_FOMPI	S8FCX2_FOMPI	S8DTS6	S8FCX2	BetaGal_dom2 domain-containing protein.	Uncharacterized protein.	0.436
S8DTX9_FOMPI	S8DTS6_FOMPI	S8DTX9	S8DTS6	Uncharacterized protein.	BetaGal_dom2 domain-containing protein.	0.562
S8DTX9_FOMPI	S8EJV5_FOMPI	S8DTX9	S8EJV5	Uncharacterized protein.	Uncharacterized protein.	0.587
S8DTX9_FOMPI	S8EYH2_FOMPI	S8DTX9	S8EYH2	Uncharacterized protein.	BetaGal_dom2 domain-containing protein.	0.562
S8DTX9_FOMPI	S8F6W3_FOMPI	S8DTX9	S8F6W3	Uncharacterized protein.	Uncharacterized protein.	0.585
S8DVA9_FOMPI	S8DTS6_FOMPI	S8DVA9	S8DTS6	Glyco_hydro_30 domain-containing protein; Belongs to the glycosyl hydrolase 30 family.	BetaGal_dom2 domain-containing protein.	0.557
S8DVA9_FOMPI	S8EYH2_FOMPI	S8DVA9	S8EYH2	Glyco_hydro_30 domain-containing protein; Belongs to the glycosyl hydrolase 30 family.	BetaGal_dom2 domain-containing protein.	0.557