Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEJ18906.1 | AEJ18908.1 | Spica_0752 | Spica_0754 | Acetylornithine deacetylase / succinyl-diaminopimelate desuccinylase. | Lysine 2,3-aminomutase YodO family protein. | 0.575 |
| AEJ18906.1 | AEJ19132.1 | Spica_0752 | Spica_0982 | Acetylornithine deacetylase / succinyl-diaminopimelate desuccinylase. | Hypothetical protein. | 0.919 |
| AEJ18906.1 | dapL | Spica_0752 | Spica_0952 | Acetylornithine deacetylase / succinyl-diaminopimelate desuccinylase. | LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | 0.909 |
| AEJ18908.1 | AEJ18906.1 | Spica_0754 | Spica_0752 | Lysine 2,3-aminomutase YodO family protein. | Acetylornithine deacetylase / succinyl-diaminopimelate desuccinylase. | 0.575 |
| AEJ18908.1 | AEJ19101.1 | Spica_0754 | Spica_0951 | Lysine 2,3-aminomutase YodO family protein. | Diaminopimelate decarboxylase. | 0.805 |
| AEJ19097.1 | AEJ19100.1 | Spica_0947 | Spica_0950 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.996 |
| AEJ19097.1 | AEJ19101.1 | Spica_0947 | Spica_0951 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate decarboxylase. | 0.967 |
| AEJ19097.1 | AEJ19466.1 | Spica_0947 | Spica_1320 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate kinase. | 0.966 |
| AEJ19097.1 | dapA | Spica_0947 | Spica_0949 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.850 |
| AEJ19097.1 | dapB | Spica_0947 | Spica_0948 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.863 |
| AEJ19097.1 | dapL | Spica_0947 | Spica_0952 | Aspartate kinase; Belongs to the aspartokinase family. | LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | 0.728 |
| AEJ19100.1 | AEJ19097.1 | Spica_0950 | Spica_0947 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.996 |
| AEJ19100.1 | AEJ19101.1 | Spica_0950 | Spica_0951 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Diaminopimelate decarboxylase. | 0.851 |
| AEJ19100.1 | AEJ19132.1 | Spica_0950 | Spica_0982 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Hypothetical protein. | 0.850 |
| AEJ19100.1 | AEJ19466.1 | Spica_0950 | Spica_1320 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Aspartate kinase. | 0.997 |
| AEJ19100.1 | dapA | Spica_0950 | Spica_0949 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.987 |
| AEJ19100.1 | dapB | Spica_0950 | Spica_0948 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.897 |
| AEJ19100.1 | dapL | Spica_0950 | Spica_0952 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | 0.816 |
| AEJ19101.1 | AEJ18908.1 | Spica_0951 | Spica_0754 | Diaminopimelate decarboxylase. | Lysine 2,3-aminomutase YodO family protein. | 0.805 |
| AEJ19101.1 | AEJ19097.1 | Spica_0951 | Spica_0947 | Diaminopimelate decarboxylase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.967 |
page 1 of 3