STRINGSTRING
B3C1_02280 B3C1_02280 B3C1_07681 B3C1_07681 pyrC pyrC B3C1_10257 B3C1_10257 B3C1_11819 B3C1_11819 B3C1_15522 B3C1_15522 B3C1_15527 B3C1_15527 B3C1_18989 B3C1_18989 B3C1_01930 B3C1_01930 B3C1_06583 B3C1_06583
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B3C1_02280COG1228 Imidazolonepropionase and related amidohydrolases. (60 aa)
B3C1_07681COG1820 N-acetylglucosamine-6-phosphate deacetylase. (374 aa)
pyrCDihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. (345 aa)
B3C1_10257Xaa-Pro dipeptidase family protein; COG1228 Imidazolonepropionase and related amidohydrolases. (424 aa)
B3C1_11819Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases. (476 aa)
B3C1_15522Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases; overlaps another CDS with the same product name. (409 aa)
B3C1_15527Amidohydrolase; COG1228 Imidazolonepropionase and related amidohydrolases; overlaps another CDS with the same product name. (1000 aa)
B3C1_18989COG1228 Imidazolonepropionase and related amidohydrolases. (370 aa)
B3C1_01930COG1820 N-acetylglucosamine-6-phosphate deacetylase. (398 aa)
B3C1_06583COG1820 N-acetylglucosamine-6-phosphate deacetylase. (376 aa)
Your Current Organism:
Gallaecimonas xiamenensis
NCBI taxonomy Id: 745411
Other names: G. xiamenensis 3-C-1, Gallaecimonas sp. 3-C-1, Gallaecimonas xiamenensis 3-C-1, Gallaecimonas xiamenensis str. 3-C-1, Gallaecimonas xiamenensis strain 3-C-1
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