STRINGSTRING
AFL79549.1 AFL79549.1 AFL79568.1 AFL79568.1 AFL79624.1 AFL79624.1 AFL79653.1 AFL79653.1 AFL79682.1 AFL79682.1 AFL79804.1 AFL79804.1 AFL79837.1 AFL79837.1 AFL79846.1 AFL79846.1 AFL79856.1 AFL79856.1 AFL79900.1 AFL79900.1 AFL79902.1 AFL79902.1 AFL79934.1 AFL79934.1 AFL79939.1 AFL79939.1 msrA msrA AFL80053.1 AFL80053.1 AFL80076.1 AFL80076.1 secF secF AFL80254.1 AFL80254.1 AFL80261.1 AFL80261.1 AFL80288.1 AFL80288.1 AFL80315.1 AFL80315.1 AFL80354.1 AFL80354.1 AFL80398.1 AFL80398.1 AFL80451.1 AFL80451.1 AFL80555.1 AFL80555.1 AFL80570.1 AFL80570.1 katG katG AFL80921.1 AFL80921.1 AFL80929.1 AFL80929.1 AFL80994.1 AFL80994.1 AFL81035.1 AFL81035.1 AFL81068.1 AFL81068.1 AFL81070.1 AFL81070.1 AFL81087.1 AFL81087.1 AFL81204.1 AFL81204.1 AFL81230.1 AFL81230.1 AFL81231.1 AFL81231.1 AFL81270.1 AFL81270.1 secY secY rpoA rpoA AFL81433.1 AFL81433.1 AFL81453.1 AFL81453.1 tuf tuf secE secE rpoB rpoB rpoC rpoC AFL81483.1 AFL81483.1 AFL81549.1 AFL81549.1 AFL81590.1 AFL81590.1 AFL81614.1 AFL81614.1 secA secA AFL81763.1 AFL81763.1 AFL81811.1 AFL81811.1 AFL81823.1 AFL81823.1 AFL81836.1 AFL81836.1 AFL81892.1 AFL81892.1 AFL81900.1 AFL81900.1 AFL81904.1 AFL81904.1 AFL81912.1 AFL81912.1 AFL81929.1 AFL81929.1 AFL81950.1 AFL81950.1 ndk ndk AFL82089.1 AFL82089.1 msrA-2 msrA-2 AFL82198.1 AFL82198.1 AFL82251.1 AFL82251.1 AFL82309.1 AFL82309.1 AFL82322.1 AFL82322.1 msrA-3 msrA-3 AFL82325.1 AFL82325.1 AFL82387.1 AFL82387.1 AFL82430.1 AFL82430.1 AFL82489.1 AFL82489.1 AFL82496.1 AFL82496.1 AFL82497.1 AFL82497.1 tpx tpx AFL82660.1 AFL82660.1 AFL82669.1 AFL82669.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFL79549.1Arabinose efflux permease family protein; PFAM: Bacterial protein of unknown function (DUF894). (421 aa)
AFL79568.1TIGRFAM: integral membrane protein. (92 aa)
AFL79624.1Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily. (384 aa)
AFL79653.1Hypothetical protein. (97 aa)
AFL79682.1PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family. (100 aa)
AFL79804.1Hypothetical protein. (304 aa)
AFL79837.1ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region. (585 aa)
AFL79846.1Peroxiredoxin; PFAM: AhpC/TSA family. (185 aa)
AFL79856.1ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter. (612 aa)
AFL79900.1Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily. (409 aa)
AFL79902.1Transcriptional regulator; PFAM: MarR family; AsnC family. (147 aa)
AFL79934.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (365 aa)
AFL79939.1ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter. (588 aa)
msrAmethionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (223 aa)
AFL80053.1PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: putative bacillithiol system oxidoreductase, YpdA family. (327 aa)
AFL80076.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (341 aa)
secFProtein translocase subunit secF,protein translocase subunit secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. (1017 aa)
AFL80254.1PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein. (298 aa)
AFL80261.1PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1. (337 aa)
AFL80288.1Hypothetical protein. (537 aa)
AFL80315.1Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (110 aa)
AFL80354.1PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein. (333 aa)
AFL80398.1Quinol:cytochrome c oxidoreductase quinone-binding subunit 2. (458 aa)
AFL80451.1Thioredoxin domain-containing protein; PFAM: Thioredoxin. (98 aa)
AFL80555.1Hypothetical protein; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain. (196 aa)
AFL80570.1Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (202 aa)
katGCatalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (758 aa)
AFL80921.1Hypothetical protein. (384 aa)
AFL80929.12-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (420 aa)
AFL80994.1PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein. (305 aa)
AFL81035.1Ferritin-like protein; Iron-storage protein. (183 aa)
AFL81068.1Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (350 aa)
AFL81070.1Hypothetical protein. (447 aa)
AFL81087.1PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family. (105 aa)
AFL81204.1Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (591 aa)
AFL81230.1Hypothetical protein. (245 aa)
AFL81231.1Hypothetical protein. (237 aa)
AFL81270.1Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme. (422 aa)
secYProtein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (447 aa)
rpoADNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (330 aa)
AFL81433.1Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; Multidrug resistance protein. (499 aa)
AFL81453.1HYR domain-containing protein; PFAM: HYR domain; TIGRFAM: Por secretion system C-terminal sorting domain. (1265 aa)
tufTranslation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (395 aa)
secEPreprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (62 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1270 aa)
rpoCDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1432 aa)
AFL81483.1PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein. (313 aa)
AFL81549.1Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme. (438 aa)
AFL81590.1ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter. (590 aa)
AFL81614.1PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase. (320 aa)
secAProtein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (1119 aa)
AFL81763.1Peroxiredoxin; PFAM: AhpC/TSA family. (294 aa)
AFL81811.1Putative Zn-dependent hydrolase of beta-lactamase fold protein; Belongs to the UPF0173 family. (226 aa)
AFL81823.1Putative Zn-dependent hydrolase of beta-lactamase fold protein. (266 aa)
AFL81836.1Protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase. (144 aa)
AFL81892.1ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter. (608 aa)
AFL81900.1PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily. (526 aa)
AFL81904.1ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle. (539 aa)
AFL81912.1Bacillithiol system protein YtxJ; PFAM: Protein of unknown function (DUF2847); TIGRFAM: bacillithiol system protein YtxJ. (130 aa)
AFL81929.1Hypothetical protein. (465 aa)
AFL81950.1Protein involved in gliding motility GldI; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; TIGRFAM: peptidyl-prolyl isomerase, gliding motility-associated. (182 aa)
ndkNucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (139 aa)
AFL82089.1Transcriptional regulator; PFAM: AsnC family. (159 aa)
msrA-2methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (178 aa)
AFL82198.1ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein. (316 aa)
AFL82251.1Peroxiredoxin; PFAM: AhpC/TSA family. (150 aa)
AFL82309.1Hypothetical protein; TIGRFAM: Chlamydial polymorphic outer membrane protein repeat. (2495 aa)
AFL82322.1PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase. (174 aa)
msrA-3methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (164 aa)
AFL82325.1Hypothetical protein. (82 aa)
AFL82387.1Peroxiredoxin; PFAM: AhpC/TSA family. (371 aa)
AFL82430.1Truncated hemoglobin. (135 aa)
AFL82489.1Cu/Zn superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (196 aa)
AFL82496.1Peroxiredoxin; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family. (211 aa)
AFL82497.1Thioredoxin domain-containing protein; PFAM: Thioredoxin. (104 aa)
tpxPeroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. (166 aa)
AFL82660.1PFAM: RNA polymerase Rpb6. (110 aa)
AFL82669.1Pyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (342 aa)
Your Current Organism:
Aequorivita sublithincola
NCBI taxonomy Id: 746697
Other names: A. sublithincola DSM 14238, Aequorivita sublithincola 9-3, Aequorivita sublithincola DSM 14238, Aequorivita sublithincola str. DSM 14238, Aequorivita sublithincola strain DSM 14238
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