107 items (Rhizophagus irregularis DAOM181602DAOM)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RIR_0163000	Ubiquitin carboxyl-terminal hydrolase. (810 aa)
	RIR_0176500	26S proteasome regulatory subunit 8; Belongs to the AAA ATPase family. (412 aa)
	RIR_0187200	26S proteasome regulatory subunit N8. (325 aa)
	RIR_0202800	Ubiquitin-conjugating enzyme E2 d. (154 aa)
	RIR_0254900	Putative Ubiquitin C. (633 aa)
	RIR_0285800	Ubiquitin carboxyl-terminal hydrolase. (492 aa)
	RIR_0285500	F-box and WD40 domain protein 1/11. (659 aa)
	RIR_0355800	Iodothyronine deiodinase-domain-containing protein. (726 aa)
	RIR_0441800	Ubiquitin-activating enzyme E1. (935 aa)
	RIR_0463200	Uncharacterized protein. (567 aa)
	RIR_0492300	Proteasome subunit alpha type. (241 aa)
	RIR_0494400	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (947 aa)
	RIR_0497500	Uncharacterized protein. (271 aa)
	RIR_0613400	Proteasome component ECM29. (640 aa)
	RIR_0613300	Proteasome component ECM29. (1209 aa)
	RIR_0641500	Nucleus protein. (189 aa)
	RIR_0654100	Ubiquitin carboxyl-terminal hydrolase. (385 aa)
	RIR_0815400	NEDD8 protease Nep1. (212 aa)
	RIR_0825500	26S proteasome regulatory subunit 6; Belongs to the AAA ATPase family. (457 aa)
	RIR_0886200	Ubiquitin domain-containing protein. (335 aa)
	RIR_0918300	Kinase-like domain-containing protein. (623 aa)
	RIR_0928400	F-box and WD-40 domain protein CDC4. (1070 aa)
	RIR_1040400	Bah domain containing protein. (371 aa)
	RIR_1161600	26S proteasome regulatory complex component. (446 aa)
	RIR_1179100	26S proteasome regulatory subunit T2; Belongs to the AAA ATPase family. (417 aa)
	RIR_1291400	26S proteasome non-ATPase regulatory subunit 3. (491 aa)
	RIR_1377300	Flagellar associated protein. (463 aa)
	RIR_1422800	E3 ubiquitin protein ligase. (887 aa)
	RIR_1432100	Ubiquitin carboxyl-terminal hydrolase 14. (1560 aa)
	RIR_1461500	Ubiquitin domain-containing protein. (335 aa)
	RIR_1545100	Ubiquitin-conjugating enzyme E2 D. (169 aa)
	RIR_1568700	Proteasome subunit alpha type. (253 aa)
	RIR_1576700	Ubiquitin-ribosomal 60S subunit protein l40b fusion protein. (79 aa)
	RIR_1569200	Ubiquitin domain containing protein. (150 aa)
	RIR_1573200	Ubiquitin-ribosomal 60S subunit protein l40b fusion protein. (232 aa)
	RIR_1596400	E2 ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (210 aa)
	RIR_1808900	Ubiquitin-related domain-containing protein. (305 aa)
	RIR_1943600	Putative F-box and WD-40 domain protein 1/11. (486 aa)
	RIR_1964700	Proteasomal ATPase-associated factor 1. (416 aa)
	RIR_1983800	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family. (171 aa)
	RIR_1996400	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (260 aa)
	RIR_2043800	26S proteasome non-ATPase regulatory subunit 9. (186 aa)
	RIR_2145300	F-box and wd domain protein. (594 aa)
	RIR_2181400	Ubiquitin-activating enzyme E1 C. (435 aa)
	RIR_2212500	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	RIR_2213900	Ubiquitin-conjugating enzyme E2 D; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
	RIR_2255400	Ubiquitin-like T4 deionase domain-containing protein. (731 aa)
	RIR_2315600	Ubiquitin carboxyl-terminal hydrolase 14. (405 aa)
	RIR_2314700	Ubiquitin domain-containing protein. (327 aa)
	RIR_2361700	Proteasome subunit beta. (194 aa)
	RIR_2369300	Ubiquitin-conjugating enzyme E2 R; Belongs to the ubiquitin-conjugating enzyme family. (244 aa)
	RIR_2369500	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (888 aa)
	RIR_2389500	Ubiquitin C. (168 aa)
	RIR_2391100	Proteasome endopeptidase complex. (125 aa)
	RIR_2474900	Ubiquitin-conjugating enzyme E2 D. (137 aa)
	RIR_2475400	Ubiquitin-conjugating enzyme E2 D. (150 aa)
	RIR_2556300	Ubiquitin carboxyl-terminal hydrolase. (227 aa)
	RIR_2580300	Vam7p. (431 aa)
	RIR_2645600	Periplasmic binding protein. (504 aa)
	RIR_2840400	Proteasome regulatory particle lid subunit rpn13. (352 aa)
	RIR_2872200	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (195 aa)
	RIR_2975600	Proteasome subunit beta. (261 aa)
	RIR_2974500	Proteasome subunit beta; Belongs to the peptidase T1B family. (225 aa)
	RIR_3083000	Proteasome activator subunit 4. (1772 aa)
	RIR_3115000	26S proteasome regulatory subunit rpn6; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (2271 aa)
	RIR_3425500	Ubiquitin ligase Cullin; Belongs to the cullin family. (778 aa)
	RIR_3425900	Ubiquitin ligase Cullin; Belongs to the cullin family. (402 aa)
	RIR_3425700	Ubiquitin ligase Cullin; Belongs to the cullin family. (504 aa)
	RIR_3488400	Pi31 proteasome regulator domain-containingprotein. (342 aa)
	RIR_3522900	26S proteasome non-ATPase regulatory subunit 5. (508 aa)
	RIR_0036830	Tis13_90532. (150 aa)
	RIR_1380900	E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family. (163 aa)
	RIR_1255100	Ubiquitin ligase Cullin; Belongs to the cullin family. (613 aa)
	RIR_2512900	F-box and WD-40 domain-containing protein CDC4. (541 aa)
	RIR_1907000	Ubiquitin ligase Cullin; Belongs to the cullin family. (770 aa)
	RIR_0676100	Proteasome subunit beta. (288 aa)
	RIR_2039000	Proteasome subunit beta. (236 aa)
	RIR_3264100	Proteasome regulatory particle subunit. (391 aa)
	RIR_0158100	Putative membrane permease. (265 aa)
	RIR_0783710	Tis13_67246. (122 aa)
	RIR_2571500	Ubiquitin domain-containing protein. (360 aa)
	RIR_2674200	Proteasome subunit alpha type. (253 aa)
	RIR_2435400	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. (150 aa)
	RIR_3492800	Proteasome subunit alpha type. (248 aa)
	RIR_0434220	Tis13_4870. (109 aa)
	RIR_0700900	Ubiquitin-conjugating enzyme/RWD-like protein. (158 aa)
	RIR_3505200	Ubiquitin domain-containing protein. (402 aa)
	RIR_1917700	Polyubiquitin. (154 aa)
	RIR_2879000	26S proteasome regulatory subunit N12. (264 aa)
	RIR_0160400	Proteasome subunit alpha type. (242 aa)
	RIR_3300000	Proteasome maturation protein. (145 aa)
	RIR_3444400	Ubiquitin 1, putative. (374 aa)
	RIR_3261000	26S proteasome regulatory complex subunit Rpn7. (386 aa)
	RIR_2508400	26S proteasome complex subunit dss1. (103 aa)
	RIR_0293800	Proteasome subunit alpha type. (249 aa)
	RIR_2984720	Tis13_25807: PROVISIONAL. (124 aa)
	RIR_1285000	Quinon protein alcohol dehydrogenase-like superfamily. (625 aa)
	RIR_2470600	Ubiquitin-conjugating enzyme E2 D. (152 aa)
	RIR_0022200	26S proteasome regulatory subunit Rpn10. (365 aa)
	RIR_1036700	Proteasome subunit alpha type. (245 aa)
	RIR_1954800	26S proteasome non-ATPase regulatory subunit 14. (315 aa)
	RIR_3090600	Ubiquitin-like protein Nedd8. (77 aa)
	RIR_3093800	26S proteasome regulatory subunit T5; Belongs to the AAA ATPase family. (431 aa)
	RIR_1273800	26S proteasome regulatory subunit T4; Belongs to the AAA ATPase family. (394 aa)
	RIR_2593300	Proteasome subunit beta. (215 aa)
	RIR_0023900	Proteasome subunit beta. (204 aa)
	RIR_0180600	26S proteasome regulatory subunit 7; Belongs to the AAA ATPase family. (433 aa)

Your Current Organism:

Rhizophagus irregularis DAOM181602DAOM

NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RIR_0022200	RIR_0023900	U9UG52	U9UVZ1	26S proteasome regulatory subunit Rpn10.	Proteasome subunit beta.	0.999
RIR_0022200	RIR_0036830	U9UG52	U9SHY8	26S proteasome regulatory subunit Rpn10.	Tis13_90532.	0.984
RIR_0022200	RIR_0158100	U9UG52	U9T5C2	26S proteasome regulatory subunit Rpn10.	Putative membrane permease.	0.900
RIR_0022200	RIR_0160400	U9UG52	U9U0E9	26S proteasome regulatory subunit Rpn10.	Proteasome subunit alpha type.	0.999
RIR_0022200	RIR_0163000	U9UG52	A0A2H5R419	26S proteasome regulatory subunit Rpn10.	Ubiquitin carboxyl-terminal hydrolase.	0.974
RIR_0022200	RIR_0176500	U9UG52	A0A2H5R4I1	26S proteasome regulatory subunit Rpn10.	26S proteasome regulatory subunit 8; Belongs to the AAA ATPase family.	0.999
RIR_0022200	RIR_0180600	U9UG52	U9UZB6	26S proteasome regulatory subunit Rpn10.	26S proteasome regulatory subunit 7; Belongs to the AAA ATPase family.	0.999
RIR_0022200	RIR_0187200	U9UG52	A0A2H5R4R3	26S proteasome regulatory subunit Rpn10.	26S proteasome regulatory subunit N8.	0.999
RIR_0022200	RIR_0202800	U9UG52	A0A2H5R5A5	26S proteasome regulatory subunit Rpn10.	Ubiquitin-conjugating enzyme E2 d.	0.557
RIR_0022200	RIR_0254900	U9UG52	A0A2H5R744	26S proteasome regulatory subunit Rpn10.	Putative Ubiquitin C.	0.783
RIR_0022200	RIR_0285500	U9UG52	A0A2H5R885	26S proteasome regulatory subunit Rpn10.	F-box and WD40 domain protein 1/11.	0.532
RIR_0022200	RIR_0285800	U9UG52	A0A2H5R872	26S proteasome regulatory subunit Rpn10.	Ubiquitin carboxyl-terminal hydrolase.	0.987
RIR_0022200	RIR_0293800	U9UG52	U9UD06	26S proteasome regulatory subunit Rpn10.	Proteasome subunit alpha type.	0.999
RIR_0022200	RIR_0355800	U9UG52	A0A2H5RAN6	26S proteasome regulatory subunit Rpn10.	Iodothyronine deiodinase-domain-containing protein.	0.783
RIR_0022200	RIR_0434220	U9UG52	U9TLQ8	26S proteasome regulatory subunit Rpn10.	Tis13_4870.	0.992
RIR_0022200	RIR_0441800	U9UG52	A0A2H5RDM3	26S proteasome regulatory subunit Rpn10.	Ubiquitin-activating enzyme E1.	0.812
RIR_0022200	RIR_0463200	U9UG52	A0A2H5REH4	26S proteasome regulatory subunit Rpn10.	Uncharacterized protein.	0.949
RIR_0022200	RIR_0492300	U9UG52	A0A2H5RFP2	26S proteasome regulatory subunit Rpn10.	Proteasome subunit alpha type.	0.990
RIR_0022200	RIR_0494400	U9UG52	A0A2H5RFP8	26S proteasome regulatory subunit Rpn10.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
RIR_0022200	RIR_0497500	U9UG52	A0A2H5RFV4	26S proteasome regulatory subunit Rpn10.	Uncharacterized protein.	0.832

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