STRINGSTRING
RIR_2511800 RIR_2511800 RIR_0488300 RIR_0488300 RIR_3315800 RIR_3315800 RIR_2141400 RIR_2141400 RIR_1906900 RIR_1906900 RIR_1723400 RIR_1723400 RIR_1128100 RIR_1128100 RIR_1088300 RIR_1088300 RIR_0718800 RIR_0718800 RIR_0157400 RIR_0157400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_2511800DNA primase; Belongs to the eukaryotic-type primase small subunit family. (473 aa)
RIR_0488300Metallo-dependent phosphatase-like protein. (309 aa)
RIR_3315800DNA polymerase epsilon catalytic subunit a. (485 aa)
RIR_2141400DNA polymerase epsilon catalytic subunit a. (489 aa)
RIR_1906900DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (482 aa)
RIR_1723400DNA polymerase epsilon catalytic subunit a. (538 aa)
RIR_1128100Formin-binding protein 4-like. (506 aa)
RIR_1088300Protein serine/threonine phosphatase 4 regulatory subunit 1. (856 aa)
RIR_0718800DNA polymerase alpha subunit B. (483 aa)
RIR_0157400DNA polymerase. (1454 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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