STRINGSTRING
RIR_2315400 RIR_2315400 RIR_0163500 RIR_0163500 RIR_0301200 RIR_0301200 RIR_0677800 RIR_0677800 RIR_0737500 RIR_0737500 RIR_1027500 RIR_1027500 RIR_1063600 RIR_1063600 RIR_1808900 RIR_1808900 RIR_1906300 RIR_1906300 RIR_1994000 RIR_1994000 RIR_2314700 RIR_2314700 RIR_2389500 RIR_2389500 RIR_2435100 RIR_2435100 RIR_2515200 RIR_2515200 RIR_2536600 RIR_2536600 RIR_2547800 RIR_2547800 RIR_2758500 RIR_2758500 RIR_3494000 RIR_3494000 RIR_1721400 RIR_1721400 RIR_3505200 RIR_3505200 RIR_3444400 RIR_3444400 RIR_3266800 RIR_3266800
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_2315400Ubiquitin domain-containing protein. (323 aa)
RIR_0163500Kxdl motif-containing protein 1 isoform x1. (125 aa)
RIR_0301200Ubiquitin domain-containing protein. (317 aa)
RIR_0677800Ubiquitin-ribosomal 40S subunit protein S31 fusion protein. (164 aa)
RIR_0737500Cyclin-dependent kinase 8/11. (416 aa)
RIR_1027500Start-like domain protein. (1104 aa)
RIR_1063600Ubiquitin C. (381 aa)
RIR_1808900Ubiquitin-related domain-containing protein. (305 aa)
RIR_1906300Start-like domain protein. (839 aa)
RIR_1994000Kexin. (774 aa)
RIR_2314700Ubiquitin domain-containing protein. (327 aa)
RIR_2389500Ubiquitin C. (168 aa)
RIR_2435100SNW domain-containing protein 1. (554 aa)
RIR_2515200Serine/threonine protein phosphatase 5 phosphatase, putative. (325 aa)
RIR_2536600Serine/threonine protein kinase. (761 aa)
RIR_2547800Cyclin protein kinase; Belongs to the cyclin family. (232 aa)
RIR_2758500Ubiquitin domain-containing protein. (329 aa)
RIR_3494000Homeobox and c2h2 transcription factor. (256 aa)
RIR_1721400Ubiquitin domain-containing protein. (318 aa)
RIR_3505200Ubiquitin domain-containing protein. (402 aa)
RIR_3444400Ubiquitin 1, putative. (374 aa)
RIR_3266800Serine/threonine kinase receptor associated protein. (334 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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