Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RIR_0022800 | RIR_0088300 | U9UIA4 | U9SSJ9 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. | 0.854 |
| RIR_0022800 | RIR_0090700 | U9UIA4 | U9TPZ6 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. | 0.883 |
| RIR_0022800 | RIR_0101300 | U9UIA4 | U9UAI2 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Syntaxin 1B/2/3. | 0.902 |
| RIR_0022800 | RIR_0148000 | U9UIA4 | A0A2H5R3E8 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Conserved oligomeric golgi complex subunit 8. | 0.424 |
| RIR_0022800 | RIR_0160600 | U9UIA4 | A0A2H5R3W4 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Synaptobrevin/VAMP-like protein; Belongs to the synaptobrevin family. | 0.998 |
| RIR_0022800 | RIR_0183000 | U9UIA4 | A0A2H5R4M0 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. | 0.468 |
| RIR_0022800 | RIR_0294000 | U9UIA4 | U9UF43 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | ADP-ribosylation factor-like protein 5B; Belongs to the small GTPase superfamily. Arf family. | 0.801 |
| RIR_0022800 | RIR_0347000 | U9UIA4 | A0A2H5RAA9 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | 0.992 |
| RIR_0022800 | RIR_0363500 | U9UIA4 | A0A2H5RAX1 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Copii-coated vesicle component. | 0.868 |
| RIR_0022800 | RIR_0433900 | U9UIA4 | A0A2H5RDC2 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. | 0.791 |
| RIR_0022800 | RIR_0486800 | U9UIA4 | U9TQ05 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | ER to Golgi transport-related protein. | 0.743 |
| RIR_0022800 | RIR_0488100 | U9UIA4 | U9T6A5 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex. | 0.998 |
| RIR_0022800 | RIR_0556600 | U9UIA4 | U9UV75 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Trafficking protein particle complex subunit 2. | 0.621 |
| RIR_0022800 | RIR_0793300 | U9UIA4 | A0A2H5RR55 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Uncharacterized protein. | 0.685 |
| RIR_0022800 | RIR_0823000 | U9UIA4 | U9UA24 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. | 0.902 |
| RIR_0022800 | RIR_0846000 | U9UIA4 | A0A2H5RSY9 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily. | 0.730 |
| RIR_0022800 | RIR_0857800 | U9UIA4 | A0A2H5RTD3 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Copii-coated vesicle component. | 0.684 |
| RIR_0022800 | RIR_1035900 | U9UIA4 | U9SP50 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Transport protein particle component-domain-containing protein. | 0.710 |
| RIR_0022800 | RIR_1060900 | U9UIA4 | A0A2H5S0J9 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | TRAPP complex core subunit BET3. | 0.828 |
| RIR_0022800 | RIR_1183900 | U9UIA4 | A0A2H5S4X1 | Longin-like domain-containing protein; Belongs to the synaptobrevin family. | Conserved oligomeric Golgi complex subunit 3. | 0.539 |
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