STRINGSTRING
RIR_0162500 RIR_0162500 RIR_3263900 RIR_3263900 RIR_0488300 RIR_0488300 RIR_3260300 RIR_3260300 RIR_2148100 RIR_2148100 RIR_1128100 RIR_1128100 RIR_1088300 RIR_1088300 RIR_2970900 RIR_2970900 RIR_0176600 RIR_0176600
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_0162500Serine/threonine-protein phosphatase. (309 aa)
RIR_3263900Sm-like ribonucleo protein. (108 aa)
RIR_0488300Metallo-dependent phosphatase-like protein. (309 aa)
RIR_3260300Dual specificity phosphatase. (143 aa)
RIR_2148100Calcium binding protein caleosin. (347 aa)
RIR_1128100Formin-binding protein 4-like. (506 aa)
RIR_1088300Protein serine/threonine phosphatase 4 regulatory subunit 1. (856 aa)
RIR_2970900Putative ser/thr protein phosphatase 2A regulatory subunit A. (590 aa)
RIR_0176600Protein kinase tyrosine protein phosphatase. (679 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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