102 items (Rhizophagus irregularis DAOM181602DAOM)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RIR_1393500	Ubiquitin-conjugating enzyme family protein. (644 aa)
	RIR_0163500	Kxdl motif-containing protein 1 isoform x1. (125 aa)
	RIR_0301200	Ubiquitin domain-containing protein. (317 aa)
	RIR_0370400	Tetratricopeptide repeat protein. (333 aa)
	RIR_0376500	Tetratricopeptide repeat protein. (1184 aa)
	RIR_0446100	Putative Polycomb protein EED. (463 aa)
	RIR_0449000	Serine/threonine protein kinase. (395 aa)
	RIR_0449400	Putative Polycomb protein EED. (509 aa)
	RIR_0487000	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (121 aa)
	RIR_0605300	Tetratricopeptide repeat protein. (1226 aa)
	RIR_0606800	Tetratricopeptide repeat protein. (1224 aa)
	RIR_0606600	Peptidase c14. (1163 aa)
	RIR_0605400	Tetratricopeptide repeat protein. (1224 aa)
	RIR_0606700	Tetratricopeptide repeat protein. (1202 aa)
	RIR_0606500	Peptidase c14 caspase catalytic subunit p20, putative. (1136 aa)
	RIR_0606100	Anaphase promoting complex subunit cdc27. (1186 aa)
	RIR_0611500	Peptidase c14. (670 aa)
	RIR_0611800	Peptidase c14. (1202 aa)
	RIR_0612600	Peptidase c14. (1004 aa)
	RIR_0615200	Tetratricopeptide repeat protein. (1222 aa)
	RIR_0615800	Peptidase c14. (1194 aa)
	RIR_0614200	Peptidase c14. (1172 aa)
	RIR_0620800	Tetratricopeptide repeat protein. (1081 aa)
	RIR_0615600	Peptidase c14. (1215 aa)
	RIR_0622000	Tetratricopeptide repeat protein. (1149 aa)
	RIR_0630600	Peptidase c14. (1208 aa)
	RIR_0677800	Ubiquitin-ribosomal 40S subunit protein S31 fusion protein. (164 aa)
	RIR_0757300	Ubiquitin-conjugating enzyme E2 D; Belongs to the ubiquitin-conjugating enzyme family. (161 aa)
	RIR_0785800	Peptidase c14. (1197 aa)
	RIR_0809300	Peptidase c14. (1203 aa)
	RIR_0914000	Peptidase c14. (1210 aa)
	RIR_0948600	Peptidase c14. (1128 aa)
	RIR_0958100	Tetratricopeptide repeat protein. (1218 aa)
	RIR_1063600	Ubiquitin C. (381 aa)
	RIR_1160700	Serine/threonine protein kinase. (513 aa)
	RIR_1243800	General transcriptional repressor. (866 aa)
	RIR_1253000	Ubiquitin-conjugating enzyme family protein. (726 aa)
	RIR_1271200	Polycomb protein EED. (473 aa)
	RIR_1273600	Mitochondrial translation protein. (566 aa)
	RIR_1555900	Tetratricopeptide tpr_1 repeat-containing protein. (1538 aa)
	RIR_1624100	Tpr repeat-containing protein. (1160 aa)
	RIR_1643900	Peptidase c14. (1216 aa)
	RIR_1733800	Peptidase c14. (1037 aa)
	RIR_1808900	Ubiquitin-related domain-containing protein. (305 aa)
	RIR_1850000	Polycomb protein EED. (444 aa)
	RIR_1872200	Tpr repeat-containing protein. (1965 aa)
	RIR_1862800	Tetratricopeptide repeat family. (1160 aa)
	RIR_1894900	Tpr repeat-containing protein. (1171 aa)
	RIR_2031400	Mitogen-activated protein kinase kinase; Belongs to the protein kinase superfamily. (317 aa)
	RIR_2042000	Protein kinase domain-containing protein. (538 aa)
	RIR_2065100	Helicase SWR1. (1557 aa)
	RIR_2137500	Histone-lysine N-methyltransferase SUV39H. (513 aa)
	RIR_2210800	Tetratricopeptide repeat protein, partial. (868 aa)
	RIR_2314700	Ubiquitin domain-containing protein. (327 aa)
	RIR_2315400	Ubiquitin domain-containing protein. (323 aa)
	RIR_2389500	Ubiquitin C. (168 aa)
	RIR_2454100	Mitochondrial 37S ribosomal protein yms-t. (81 aa)
	RIR_2536600	Serine/threonine protein kinase. (761 aa)
	RIR_2563300	RAD50-like DNA repair protein. (1273 aa)
	RIR_2585500	Copii-coated vesicle component. (912 aa)
	RIR_2659000	Telomere-binding alpha subunit central domain protein. (546 aa)
	RIR_2758500	Ubiquitin domain-containing protein. (329 aa)
	RIR_2760400	Tetratricopeptide repeat protein. (1221 aa)
	RIR_2763700	Ste/ste20 protein kinase. (804 aa)
	RIR_2764500	Tetratricopeptide repeat family. (1148 aa)
	RIR_2770300	Anaphase promoting complex subunit cdc27. (1223 aa)
	RIR_2770500	Tetratricopeptide repeat protein. (1213 aa)
	RIR_2805000	Tetratricopeptide repeat protein. (1221 aa)
	RIR_2826600	Peptidase c14. (701 aa)
	RIR_2873300	Mitogen-activated protein kinase kinase. (805 aa)
	RIR_2875300	Polycomb protein EED. (463 aa)
	RIR_2879500	Histone H2B; Belongs to the histone H2B family. (175 aa)
	RIR_2881310	Histone H2B; Belongs to the histone H2B family. (171 aa)
	RIR_2943700	Peptidase c14. (834 aa)
	RIR_2950700	Peptidase c14 caspase catalytic subunit p20. (708 aa)
	RIR_2970800	Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family. (320 aa)
	RIR_2973900	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (411 aa)
	RIR_3080500	Mitochondrial protein, duf1674 family. (120 aa)
	RIR_3127900	Tetratricopeptide repeat protein. (1178 aa)
	RIR_3127200	Tetratricopeptide repeat protein. (1147 aa)
	RIR_3127100	Ankyrin repeat protein. (938 aa)
	RIR_3128100	Peptidase c14. (1027 aa)
	RIR_3140500	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (995 aa)
	RIR_3382500	Peptidase c14. (1197 aa)
	RIR_3390000	Tpr repeat-containing protein. (1193 aa)
	RIR_3419500	Peptidase c14. (1191 aa)
	RIR_3472800	Tpr repeat-containing protein. (1228 aa)
	RIR_3472400	Anaphase promoting complex subunit cdc27. (1175 aa)
	RIR_3473000	Tetratricopeptide repeat. (1215 aa)
	RIR_3504700	Thioredoxin. (586 aa)
	RIR_3489000	Polycomb protein SUZ12. (540 aa)
	RIR_3535800	Uncharacterized protein. (88 aa)
	RIR_3535810	JEMT01027768.1_cds_EXX56255.1_23736: PROVISIONAL. (77 aa)
	RIR_1721400	Ubiquitin domain-containing protein. (318 aa)
	RIR_1969100	Metallo-dependent phosphatase-like protein. (869 aa)
	RIR_2504900	Mitogen-activated protein kinase kinase; Belongs to the protein kinase superfamily. (383 aa)
	RIR_3118600	ASF1 like histone chaperone-domain-containing protein. (224 aa)
	RIR_3299600	Ubiquitin-conjugating enzyme E2 C-like; Belongs to the ubiquitin-conjugating enzyme family. (178 aa)
	RIR_1113900	Thioredoxin; Belongs to the thioredoxin family. (109 aa)
	RIR_3505200	Ubiquitin domain-containing protein. (402 aa)
	RIR_3444400	Ubiquitin 1, putative. (374 aa)
	RIR_2284810	Tis13_91786: PROVISIONAL. (148 aa)

Your Current Organism:

Rhizophagus irregularis DAOM181602DAOM

NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RIR_0163500	RIR_0301200	A0A2H5R408	A0A2H5R8R1	Kxdl motif-containing protein 1 isoform x1.	Ubiquitin domain-containing protein.	0.650
RIR_0163500	RIR_0677800	A0A2H5R408	A0A2H5RM81	Kxdl motif-containing protein 1 isoform x1.	Ubiquitin-ribosomal 40S subunit protein S31 fusion protein.	0.805
RIR_0163500	RIR_1063600	A0A2H5R408	A0A2H5S0L6	Kxdl motif-containing protein 1 isoform x1.	Ubiquitin C.	0.778
RIR_0163500	RIR_1721400	A0A2H5R408	U9STG1	Kxdl motif-containing protein 1 isoform x1.	Ubiquitin domain-containing protein.	0.650
RIR_0163500	RIR_1808900	A0A2H5R408	A0A2H5SS37	Kxdl motif-containing protein 1 isoform x1.	Ubiquitin-related domain-containing protein.	0.778
RIR_0163500	RIR_2314700	A0A2H5R408	A0A2H5TA98	Kxdl motif-containing protein 1 isoform x1.	Ubiquitin domain-containing protein.	0.650
RIR_0163500	RIR_2315400	A0A2H5R408	A0A2H5TAA3	Kxdl motif-containing protein 1 isoform x1.	Ubiquitin domain-containing protein.	0.650
RIR_0163500	RIR_2389500	A0A2H5R408	A0A2H5TCK2	Kxdl motif-containing protein 1 isoform x1.	Ubiquitin C.	0.778
RIR_0163500	RIR_2536600	A0A2H5R408	A0A2H5THP9	Kxdl motif-containing protein 1 isoform x1.	Serine/threonine protein kinase.	0.805
RIR_0163500	RIR_2758500	A0A2H5R408	A0A2H5TQP9	Kxdl motif-containing protein 1 isoform x1.	Ubiquitin domain-containing protein.	0.650
RIR_0163500	RIR_3444400	A0A2H5R408	U9U9U3	Kxdl motif-containing protein 1 isoform x1.	Ubiquitin 1, putative.	0.650
RIR_0163500	RIR_3505200	A0A2H5R408	U9TRY1	Kxdl motif-containing protein 1 isoform x1.	Ubiquitin domain-containing protein.	0.650
RIR_0301200	RIR_0163500	A0A2H5R8R1	A0A2H5R408	Ubiquitin domain-containing protein.	Kxdl motif-containing protein 1 isoform x1.	0.650
RIR_0301200	RIR_0487000	A0A2H5R8R1	A0A2H5RFF9	Ubiquitin domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.748
RIR_0301200	RIR_0757300	A0A2H5R8R1	A0A2H5RPX4	Ubiquitin domain-containing protein.	Ubiquitin-conjugating enzyme E2 D; Belongs to the ubiquitin-conjugating enzyme family.	0.441
RIR_0301200	RIR_1063600	A0A2H5R8R1	A0A2H5S0L6	Ubiquitin domain-containing protein.	Ubiquitin C.	0.555
RIR_0301200	RIR_1253000	A0A2H5R8R1	A0A2H5S791	Ubiquitin domain-containing protein.	Ubiquitin-conjugating enzyme family protein.	0.621
RIR_0301200	RIR_1393500	A0A2H5R8R1	A0A2H5SC89	Ubiquitin domain-containing protein.	Ubiquitin-conjugating enzyme family protein.	0.621
RIR_0301200	RIR_1808900	A0A2H5R8R1	A0A2H5SS37	Ubiquitin domain-containing protein.	Ubiquitin-related domain-containing protein.	0.555
RIR_0301200	RIR_1969100	A0A2H5R8R1	U9SVR6	Ubiquitin domain-containing protein.	Metallo-dependent phosphatase-like protein.	0.631

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