STRINGSTRING
RIR_2570200 RIR_2570200 RIR_0090200 RIR_0090200 RIR_0092000 RIR_0092000 RIR_0186900 RIR_0186900 RIR_0357400 RIR_0357400 RIR_0402100 RIR_0402100 RIR_0420700 RIR_0420700 RIR_0442000 RIR_0442000 RIR_0446100 RIR_0446100 RIR_0449400 RIR_0449400 RIR_0487000 RIR_0487000 RIR_0489000 RIR_0489000 RIR_0495500 RIR_0495500 RIR_0559700 RIR_0559700 RIR_0587000 RIR_0587000 RIR_0640410 RIR_0640410 RIR_0669600 RIR_0669600 RIR_0711600 RIR_0711600 RIR_0719900 RIR_0719900 RIR_0765000 RIR_0765000 RIR_0833500 RIR_0833500 RIR_0989900 RIR_0989900 RIR_0997600 RIR_0997600 RIR_1021800 RIR_1021800 RIR_1056700 RIR_1056700 RIR_1086600 RIR_1086600 RIR_1113000 RIR_1113000 RIR_1175200 RIR_1175200 RIR_1271200 RIR_1271200 RIR_1288200 RIR_1288200 RIR_1284100 RIR_1284100 RIR_1361700 RIR_1361700 RIR_1569300 RIR_1569300 RIR_1678200 RIR_1678200 RIR_1729500 RIR_1729500 RIR_1808400 RIR_1808400 RIR_1812200 RIR_1812200 RIR_1850000 RIR_1850000 RIR_1911000 RIR_1911000 RIR_1983100 RIR_1983100 RIR_1986700 RIR_1986700 RIR_1989000 RIR_1989000 RIR_2122200 RIR_2122200 RIR_2124100 RIR_2124100 RIR_2137500 RIR_2137500 RIR_2225700 RIR_2225700 RIR_2245200 RIR_2245200 RIR_2346600 RIR_2346600 RIR_2435900 RIR_2435900 RIR_2486800 RIR_2486800 RIR_2505100 RIR_2505100 RIR_2518800 RIR_2518800 RIR_2518700 RIR_2518700 RIR_2535900 RIR_2535900 RIR_2585500 RIR_2585500 RIR_0746600 RIR_0746600 RIR_2675100 RIR_2675100 RIR_2701100 RIR_2701100 RIR_2850200 RIR_2850200 RIR_2874000 RIR_2874000 RIR_2875300 RIR_2875300 RIR_2879600 RIR_2879600 RIR_2879500 RIR_2879500 RIR_2881310 RIR_2881310 RIR_2891400 RIR_2891400 RIR_3065400 RIR_3065400 RIR_3093200 RIR_3093200 RIR_3116800 RIR_3116800 RIR_3143800 RIR_3143800 RIR_3169700 RIR_3169700 RIR_3192900 RIR_3192900 RIR_3221300 RIR_3221300 RIR_3266700 RIR_3266700 RIR_3260900 RIR_3260900 RIR_3272400 RIR_3272400 RIR_3342100 RIR_3342100 RIR_3439400 RIR_3439400 RIR_3445800 RIR_3445800 RIR_3439300 RIR_3439300 RIR_3455800 RIR_3455800 RIR_3450500 RIR_3450500 RIR_3487700 RIR_3487700 RIR_3489000 RIR_3489000 RIR_2892400 RIR_2892400 RIR_1265000 RIR_1265000 RIR_2254100 RIR_2254100 RIR_1676100 RIR_1676100 RIR_2562800 RIR_2562800 SUS1 SUS1 RIR_3479900 RIR_3479900 RIR_0070000 RIR_0070000 RIR_1256400 RIR_1256400 RIR_0493900 RIR_0493900 RIR_0190400 RIR_0190400 RIR_2596500 RIR_2596500 RIR_3439100 RIR_3439100 RIR_1947000 RIR_1947000 RIR_0825900 RIR_0825900 RIR_2875500 RIR_2875500 RIR_2970300 RIR_2970300 RIR_2699700 RIR_2699700 RIR_1808800 RIR_1808800 RIR_3350300 RIR_3350300 RIR_2284810 RIR_2284810 RIR_0689400 RIR_0689400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_2570200Elongator complex protein 2. (881 aa)
RIR_0090200Saga complex subunit spt20. (859 aa)
RIR_0092000Histone demethylase jmj1. (736 aa)
RIR_0186900Bzip transcription factor. (528 aa)
RIR_0357400Histone H2A; Belongs to the histone H2A family. (233 aa)
RIR_0402100Set domain-containing protein-lysine n-methyltransferase. (301 aa)
RIR_0420700S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (338 aa)
RIR_0442000Chromatin remodeling complex subunit. (1677 aa)
RIR_0446100Putative Polycomb protein EED. (463 aa)
RIR_0449400Putative Polycomb protein EED. (509 aa)
RIR_0487000Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (121 aa)
RIR_0489000S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (573 aa)
RIR_0495500Type I protein arginine methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (408 aa)
RIR_0559700Homeodomain-like DNA binding domain-containing transcription factor. (237 aa)
RIR_0587000Histone H2A; Belongs to the histone H2A family. (127 aa)
RIR_0640410Uncharacterized protein. (205 aa)
RIR_0669600Phd zinc finger-containing putative transcriptional regulator. (1383 aa)
RIR_0711600Chromatin structure-remodeling complex subunit RSC1/2. (595 aa)
RIR_0719900SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D. (509 aa)
RIR_0765000Histone deacetylation-related protein. (1277 aa)
RIR_0833500Histone-lysine n-methyltransferase setmar. (193 aa)
RIR_0989900Transcription initiation factor IID, 18kD subunit-domain-containing protein. (308 aa)
RIR_0997600Mortality factor 4-like protein 1. (262 aa)
RIR_1021800Transposable element tc3 transposase. (279 aa)
RIR_1056700Vacuolar protein sorting-associated protein 72. (400 aa)
RIR_1086600Histone demethylase jmj1. (393 aa)
RIR_1113000Ribosomal lysine methyltransferase set10. (590 aa)
RIR_1175200Clr6 histone deacetylase complex subunit sds3. (498 aa)
RIR_1271200Polycomb protein EED. (473 aa)
RIR_1288200Putative Clr6 histone deacetylase complex subunit SDS3. (303 aa)
RIR_1284100Set and mynd domain-containing protein 4-like. (274 aa)
RIR_1361700Uncharacterized protein. (282 aa)
RIR_1569300SAGA-associated factor 29. (290 aa)
RIR_1678200SWI/SNF chromatin-remodeling complex subunit SWI1. (1035 aa)
RIR_1729500Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. (1314 aa)
RIR_1808400Cysteine-rich protein 2-binding protein-like. (449 aa)
RIR_1812200Swi/snf-related matrix associated protein. (971 aa)
RIR_1850000Polycomb protein EED. (444 aa)
RIR_1911000Histone-lysine n-methyltransferase. (733 aa)
RIR_198310040S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (269 aa)
RIR_1986700Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (434 aa)
RIR_1989000Transcription factor, atf-creb family. (496 aa)
RIR_2122200Chromatin structure-remodeling complex subunit RSC9. (729 aa)
RIR_2124100SET and MYND domain-containing protein. (518 aa)
RIR_2137500Histone-lysine N-methyltransferase SUV39H. (513 aa)
RIR_2225700Uncharacterized protein. (154 aa)
RIR_2245200Histone-lysine N-methyltransferase (Ash1). (566 aa)
RIR_2346600Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (123 aa)
RIR_2435900Mitochondrial intermembrane space protein. (143 aa)
RIR_2486800Histone lysine methyltransferase, set, putative. (308 aa)
RIR_2505100SET and MYND domain-containing protein. (575 aa)
RIR_2518800Uncharacterized protein. (120 aa)
RIR_2518700Homeodomain-like DNA binding domain-containing transcription factor. (69 aa)
RIR_2535900Histone H2A; Belongs to the histone H2A family. (205 aa)
RIR_2585500Copii-coated vesicle component. (912 aa)
RIR_0746600Homeodomain-like DNA binding domain-containing transcription factor. (223 aa)
RIR_2675100Histone demethylase Jmj1 (Predicted). (494 aa)
RIR_2701100Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (610 aa)
RIR_2850200Histone-lysine N-methyltransferase SUV420H. (928 aa)
RIR_2874000Elongator complex protein 5. (355 aa)
RIR_2875300Polycomb protein EED. (463 aa)
RIR_2879600Histone H2A; Belongs to the histone H2A family. (135 aa)
RIR_2879500Histone H2B; Belongs to the histone H2B family. (175 aa)
RIR_2881310Histone H2B; Belongs to the histone H2B family. (171 aa)
RIR_2891400Homeodomain-like DNA binding domain-containing transcription factor. (237 aa)
RIR_3065400Negative regulation of gluconeogenesis-related protein. (682 aa)
RIR_3093200Histone acetyltransferase type b subunit 2. (439 aa)
RIR_3116800Putative Histone demethylase JARID1. (1195 aa)
RIR_3143800Histone-lysine N-methyltransferase, H3 lysine-36 specific. (765 aa)
RIR_3169700Uncharacterized protein. (82 aa)
RIR_3192900Homeodomain-like DNA binding domain-containing transcription factor. (284 aa)
RIR_3221300Bromo domain-containing protein. (414 aa)
RIR_3266700SAGA-associated factor 11. (313 aa)
RIR_3260900Ribosomal lysine N-methyltransferase 4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that monomethylates 60S ribosomal protein L42. Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SETD6 subfamily. (449 aa)
RIR_3272400SWI/SNF-related matrix associated protein. (503 aa)
RIR_3342100ATP-dependent helicase STH1/SNF2. (1383 aa)
RIR_3439400Histone-lysine N-methyltransferase, H3 lysine-4 specific. (1115 aa)
RIR_3445800Mrg family clr6 histone deacetylase complex subunit alp13. (469 aa)
RIR_3439300Histone-binding protein RBBP4. (455 aa)
RIR_3455800Elongator complex subunit Elp4 (Predicted). (421 aa)
RIR_3450500Homeodomain-like DNA binding domain-containing transcription factor. (210 aa)
RIR_3487700Bromodomain containing protein 1, bdc1. (764 aa)
RIR_3489000Polycomb protein SUZ12. (540 aa)
RIR_2892400Dpy-30 domain protein sdc1. (218 aa)
RIR_1265000Mortality factor 4-like protein 1. (336 aa)
RIR_2254100Histone H2A; Belongs to the histone H2A family. (168 aa)
RIR_1676100Jmjc domain-containing histone demethylation protein 1. (588 aa)
RIR_2562800SWR1-complex protein 4. (476 aa)
SUS1Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] (105 aa)
RIR_3479900RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (473 aa)
RIR_0070000Histone H2A; Belongs to the histone H2A family. (137 aa)
RIR_1256400Phd-finger domain-containing protein. (613 aa)
RIR_0493900Class 2 transcription repressor nc2 beta subunit. (148 aa)
RIR_0190400Map3k12-binding inhibitory protein 1 isoform x2. (572 aa)
RIR_2596500Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (415 aa)
RIR_3439100ATP-dependent helicase STH1/SNF2. (1446 aa)
RIR_1947000SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C. (1100 aa)
RIR_0825900Actin-like protein 6A; Belongs to the actin family. (442 aa)
RIR_2875500Histone deacetylase complex subunit SAP18. (219 aa)
RIR_2970300Elongator complex protein 6. (294 aa)
RIR_2699700CrcB-like protein-domain-containing protein. (375 aa)
RIR_1808800Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
RIR_3350300Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (548 aa)
RIR_2284810Tis13_91786: PROVISIONAL. (148 aa)
RIR_0689400Mortality factor 4-like protein 1. (281 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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