STRINGSTRING
RIR_0179300 RIR_0179300 RIR_0617800 RIR_0617800 MDM34 MDM34 RIR_0087700 RIR_0087700 RIR_3453800 RIR_3453800 RIR_1063600 RIR_1063600 RIR_1178300 RIR_1178300 RIR_1670600 RIR_1670600 RIR_2740910 RIR_2740910 RIR_1161400 RIR_1161400 RIR_1808900 RIR_1808900 RIR_3445700 RIR_3445700 RIR_3270100 RIR_3270100 RIR_3068200 RIR_3068200 RIR_3063600 RIR_3063600 RIR_2877800 RIR_2877800 RIR_2843300 RIR_2843300 RIR_2661300 RIR_2661300 RIR_2389500 RIR_2389500 RIR_1828900 RIR_1828900
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_0179300Serine/threonine-protein kinase ULK/ATG1. (821 aa)
RIR_0617800Mitochondrial import receptor subunit tom40. (305 aa)
MDM34Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10. (551 aa)
RIR_0087700Mitochondrial outer membrane translocase complex, subunit Tom22. (152 aa)
RIR_3453800Ubiquitin protein ligase. (249 aa)
RIR_1063600Ubiquitin C. (381 aa)
RIR_1178300Mitofusin. (390 aa)
RIR_1670600Mitochondrial import receptor subunit TOM20. (482 aa)
RIR_2740910Tis13_8203: PROVISIONAL. (94 aa)
RIR_1161400Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. (298 aa)
RIR_1808900Ubiquitin-related domain-containing protein. (305 aa)
RIR_3445700Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (276 aa)
RIR_3270100Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (404 aa)
RIR_3068200Autophagy-related protein. (141 aa)
RIR_3063600Fun14 family containing protein. (274 aa)
RIR_2877800Uncharacterized protein. (330 aa)
RIR_2843300Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. (140 aa)
RIR_2661300Mitochondrial import receptor subunit TOM70. (590 aa)
RIR_2389500Ubiquitin C. (168 aa)
RIR_1828900Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (328 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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