STRINGSTRING
RIR_0022200 RIR_0022200 RIR_2389500 RIR_2389500 RIR_2536600 RIR_2536600 RIR_3083000 RIR_3083000 RIR_3488400 RIR_3488400 RIR_3522900 RIR_3522900 RIR_1943600 RIR_1943600 RIR_1808900 RIR_1808900 RIR_1063600 RIR_1063600 RIR_0677800 RIR_0677800 RIR_0285500 RIR_0285500 RIR_0163500 RIR_0163500
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_002220026S proteasome regulatory subunit Rpn10. (365 aa)
RIR_2389500Ubiquitin C. (168 aa)
RIR_2536600Serine/threonine protein kinase. (761 aa)
RIR_3083000Proteasome activator subunit 4. (1772 aa)
RIR_3488400Pi31 proteasome regulator domain-containingprotein. (342 aa)
RIR_352290026S proteasome non-ATPase regulatory subunit 5. (508 aa)
RIR_1943600Putative F-box and WD-40 domain protein 1/11. (486 aa)
RIR_1808900Ubiquitin-related domain-containing protein. (305 aa)
RIR_1063600Ubiquitin C. (381 aa)
RIR_0677800Ubiquitin-ribosomal 40S subunit protein S31 fusion protein. (164 aa)
RIR_0285500F-box and WD40 domain protein 1/11. (659 aa)
RIR_0163500Kxdl motif-containing protein 1 isoform x1. (125 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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