STRINGSTRING
RIR_3496500 RIR_3496500 RIR_3488400 RIR_3488400 RIR_3522900 RIR_3522900 RIR_1721400 RIR_1721400 RIR_3493100 RIR_3493100 RIR_1077600 RIR_1077600 RIR_3101900 RIR_3101900 RIR_0301200 RIR_0301200 RIR_1256300 RIR_1256300 RIR_2189300 RIR_2189300 RIR_3505200 RIR_3505200 RIR_3444400 RIR_3444400 RIR_0163500 RIR_0163500 RIR_2740200 RIR_2740200 RIR_2389500 RIR_2389500 RIR_2315400 RIR_2315400 RIR_2314700 RIR_2314700 RIR_1859600 RIR_1859600 RIR_1808900 RIR_1808900 RIR_1194300 RIR_1194300 RIR_1150100 RIR_1150100 RIR_1063600 RIR_1063600 RIR_2758500 RIR_2758500 RIR_2825500 RIR_2825500 RIR_3469500 RIR_3469500
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_3496500Exportin-1. (1760 aa)
RIR_3488400Pi31 proteasome regulator domain-containingprotein. (342 aa)
RIR_352290026S proteasome non-ATPase regulatory subunit 5. (508 aa)
RIR_1721400Ubiquitin domain-containing protein. (318 aa)
RIR_3493100Protein-tyrosine phosphatase-like protein. (286 aa)
RIR_1077600Serine/threonine-protein kinase brsk2-like isoform x3. (544 aa)
RIR_3101900Cell division control protein 42. (191 aa)
RIR_0301200Ubiquitin domain-containing protein. (317 aa)
RIR_1256300Non-specific serine/threonine protein kinase. (719 aa)
RIR_2189300Non-specific serine/threonine protein kinase. (705 aa)
RIR_3505200Ubiquitin domain-containing protein. (402 aa)
RIR_3444400Ubiquitin 1, putative. (374 aa)
RIR_0163500Kxdl motif-containing protein 1 isoform x1. (125 aa)
RIR_2740200Rho family GTPase Rho1. (167 aa)
RIR_2389500Ubiquitin C. (168 aa)
RIR_2315400Ubiquitin domain-containing protein. (323 aa)
RIR_2314700Ubiquitin domain-containing protein. (327 aa)
RIR_1859600Protein-tyrosine phosphatase. (168 aa)
RIR_1808900Ubiquitin-related domain-containing protein. (305 aa)
RIR_1194300Cell division control protein 42. (231 aa)
RIR_1150100Rho family GTPase Rho1. (679 aa)
RIR_1063600Ubiquitin C. (381 aa)
RIR_2758500Ubiquitin domain-containing protein. (329 aa)
RIR_2825500Uncharacterized protein. (343 aa)
RIR_3469500Rho family GTPase Rho1. (197 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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