STRINGSTRING
RIR_0066700 RIR_0066700 RIR_0085500 RIR_0085500 RIR_0107600 RIR_0107600 RIR_0109400 RIR_0109400 RIR_0156600 RIR_0156600 RIR_0163500 RIR_0163500 RIR_0215500 RIR_0215500 RIR_0215400 RIR_0215400 RIR_0218200 RIR_0218200 RIR_0215300 RIR_0215300 RIR_0274600 RIR_0274600 RIR_0276600 RIR_0276600 RIR_0301200 RIR_0301200 SLX1 SLX1 RIR_0476800 RIR_0476800 RIR_0487000 RIR_0487000 RIR_0494000 RIR_0494000 RIR_0510300 RIR_0510300 RIR_0524900 RIR_0524900 RIR_0533600 RIR_0533600 RIR_0569000 RIR_0569000 RIR_0677800 RIR_0677800 RIR_0718900 RIR_0718900 RIR_0763400 RIR_0763400 RIR_0835600 RIR_0835600 RIR_0846200 RIR_0846200 RIR_0930500 RIR_0930500 RIR_0935700 RIR_0935700 RIR_1055200 RIR_1055200 RIR_1063600 RIR_1063600 RIR_1092600 RIR_1092600 RIR_1159400 RIR_1159400 RIR_1159500 RIR_1159500 RIR_1243900 RIR_1243900 RIR_1285500 RIR_1285500 RIR_1361200 RIR_1361200 RIR_1361300 RIR_1361300 RIR_1363900 RIR_1363900 RIR_1374900 RIR_1374900 RIR_1432000 RIR_1432000 RIR_1563100 RIR_1563100 RIR_1575400 RIR_1575400 RIR_1568600 RIR_1568600 RIR_1577500 RIR_1577500 RIR_1577600 RIR_1577600 RIR_1618100 RIR_1618100 RIR_1617400 RIR_1617400 RIR_1700400 RIR_1700400 RIR_1797000 RIR_1797000 RIR_1796400 RIR_1796400 RIR_1796900 RIR_1796900 RIR_1803800 RIR_1803800 RIR_1808900 RIR_1808900 RIR_1803900 RIR_1803900 RIR_1817900 RIR_1817900 RIR_1838900 RIR_1838900 RIR_1852300 RIR_1852300 RIR_1852310 RIR_1852310 RIR_1857900 RIR_1857900 RIR_1852200 RIR_1852200 RIR_1902000 RIR_1902000 RIR_1911600 RIR_1911600 RIR_1977500 RIR_1977500 RIR_1978600 RIR_1978600 RIR_1981200 RIR_1981200 RIR_1997200 RIR_1997200 RIR_1991400 RIR_1991400 RIR_2042400 RIR_2042400 RIR_2045900 RIR_2045900 RIR_2063900 RIR_2063900 RIR_2066400 RIR_2066400 RIR_2116200 RIR_2116200 RIR_2137000 RIR_2137000 RIR_2137100 RIR_2137100 RIR_2136900 RIR_2136900 RIR_2170000 RIR_2170000 RIR_2170700 RIR_2170700 RIR_2189700 RIR_2189700 RIR_2299400 RIR_2299400 RIR_2299500 RIR_2299500 RIR_2299300 RIR_2299300 RIR_2314700 RIR_2314700 RIR_2315400 RIR_2315400 RIR_2328400 RIR_2328400 RIR_2328300 RIR_2328300 RIR_2346600 RIR_2346600 RIR_2352400 RIR_2352400 RIR_2389500 RIR_2389500 RIR_2409500 RIR_2409500 RIR_2445500 RIR_2445500 RIR_2470500 RIR_2470500 RIR_2536600 RIR_2536600 RIR_2545400 RIR_2545400 RIR_2559000 RIR_2559000 RIR_2563300 RIR_2563300 RIR_2605000 RIR_2605000 RIR_2604900 RIR_2604900 RIR_2635000 RIR_2635000 RIR_2657700 RIR_2657700 RIR_2663600 RIR_2663600 RIR_2680900 RIR_2680900 RIR_2732900 RIR_2732900 RIR_2758500 RIR_2758500 RIR_2800300 RIR_2800300 RIR_2800200 RIR_2800200 RIR_2818300 RIR_2818300 RIR_2873700 RIR_2873700 RIR_2879500 RIR_2879500 RIR_2881310 RIR_2881310 RIR_2883610 RIR_2883610 RIR_2973900 RIR_2973900 RIR_3113100 RIR_3113100 RIR_3130200 RIR_3130200 RIR_3183700 RIR_3183700 RIR_3183800 RIR_3183800 RIR_3195900 RIR_3195900 RIR_3245400 RIR_3245400 RIR_3251500 RIR_3251500 RIR_3313300 RIR_3313300 RIR_3327300 RIR_3327300 RIR_3381900 RIR_3381900 RIR_3382000 RIR_3382000 RIR_3406400 RIR_3406400 RIR_3481200 RIR_3481200 RIR_3535800 RIR_3535800 RIR_3535810 RIR_3535810 RIR_1930000 RIR_1930000 RIR_2593800 RIR_2593800 RIR_3024400 RIR_3024400 RIR_1721400 RIR_1721400 RIR_1969100 RIR_1969100 GLOINDRAFT_999 GLOINDRAFT_999 RIR_3070300 RIR_3070300 RIR_2506300 RIR_2506300 RIR_2216700 RIR_2216700 RIR_2680910 RIR_2680910 RIR_3456410 RIR_3456410 RIR_3505500 RIR_3505500 RIR_2500100 RIR_2500100 RIR_0169900 RIR_0169900 RIR_1796410 RIR_1796410 RIR_0185400 RIR_0185400 RIR_3117700 RIR_3117700 RIR_1192700 RIR_1192700 RIR_3505200 RIR_3505200 RIR_0284610 RIR_0284610 RIR_2168910 RIR_2168910 RIR_1577610 RIR_1577610 GLOINDRAFT_287 GLOINDRAFT_287 RIR_0218300 RIR_0218300 RIR_2446500 RIR_2446500 RIR_2452000 RIR_2452000 RIR_1796420 RIR_1796420 RIR_3444400 RIR_3444400 RIR_2434700 RIR_2434700 RIR_2873900 RIR_2873900
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_0066700Reverse transcriptase. (525 aa)
RIR_0085500ATP-dependent helicase. (1380 aa)
RIR_0107600Uncharacterized protein. (513 aa)
RIR_0109400Protein kinase domain-containing protein. (545 aa)
RIR_0156600Serine/threonine-protein phosphatase. (771 aa)
RIR_0163500Kxdl motif-containing protein 1 isoform x1. (125 aa)
RIR_0215500Uncharacterized protein. (478 aa)
RIR_0215400Uncharacterized protein. (128 aa)
RIR_0218200Uncharacterized protein. (387 aa)
RIR_0215300ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (478 aa)
RIR_0274600Pho85p cyclin of the pho80p subfamily pcl7p. (731 aa)
RIR_0276600Ml domain-containing protein. (404 aa)
RIR_0301200Ubiquitin domain-containing protein. (317 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (313 aa)
RIR_0476800Topoisomerase 1-associated factor 1. (674 aa)
RIR_0487000Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (121 aa)
RIR_0494000DNA repair protein RAD51. (346 aa)
RIR_0510300Rad51-associated protein brh2. (1098 aa)
RIR_0524900Tyrosyl-DNA phosphodiesterase 1. (806 aa)
RIR_0533600Cell cycle arrest in response to pheromone-related protein. (635 aa)
RIR_0569000Topoisomerase 1-associated factor 1. (1019 aa)
RIR_0677800Ubiquitin-ribosomal 40S subunit protein S31 fusion protein. (164 aa)
RIR_0718900Uncharacterized protein. (185 aa)
RIR_0763400Methionine aminopeptidase 1. (481 aa)
RIR_0835600SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5. (1067 aa)
RIR_0846200RAD51-like protein 1. (377 aa)
RIR_0930500G1/S-specific cyclin plc1; Belongs to the cyclin family. (454 aa)
RIR_0935700ATP-dependent DNA helicase recq. (135 aa)
RIR_1055200ATP dependent DNA helicase. (1177 aa)
RIR_1063600Ubiquitin C. (381 aa)
RIR_1092600DNA ligase 1. (533 aa)
RIR_1159400ATP dependent DNA helicase. (487 aa)
RIR_1159500Uncharacterized protein. (581 aa)
RIR_1243900Non-homologous end-joining factor 1. (364 aa)
RIR_1285500Serine/threonine-protein kinase Chk2; Belongs to the protein kinase superfamily. (480 aa)
RIR_1361200ATP-dependent helicase. (1309 aa)
RIR_1361300Aaa ATPase. (539 aa)
RIR_1363900ATP dependent DNA helicase. (1410 aa)
RIR_1374900DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (331 aa)
RIR_1432000ATP dependent DNA helicase. (1307 aa)
RIR_1563100ATP dependent DNA helicase. (1552 aa)
RIR_1575400G1/S-specific cyclin pcl5. (465 aa)
RIR_1568600G1/S-specific cyclin pcl5. (424 aa)
RIR_1577500ATP dependent DNA helicase. (530 aa)
RIR_1577600Uncharacterized protein. (613 aa)
RIR_1618100ATP-dependent helicase. (1285 aa)
RIR_1617400Tyrosyl-DNA phosphodiesterase 1. (610 aa)
RIR_1700400RNA-directed DNA polymerase from mobile element jockey-like, partial. (532 aa)
RIR_1797000ATP dependent DNA helicase. (598 aa)
RIR_1796400Uncharacterized protein. (581 aa)
RIR_1796900Uncharacterized protein. (422 aa)
RIR_1803800Asparaginyl-tRNA synthetase. (431 aa)
RIR_1808900Ubiquitin-related domain-containing protein. (305 aa)
RIR_1803900Asparagine-tRNA ligase. (67 aa)
RIR_1817900Exonuclease 3'-5' domain-containing protein 2-like. (278 aa)
RIR_1838900Gh25199. (255 aa)
RIR_1852300Uncharacterized protein. (179 aa)
RIR_1852310JEMT01013136.1_cds_EXX74194.1_5831: PROVISIONAL. (94 aa)
RIR_1857900ATP dependent DNA helicase. (1416 aa)
RIR_1852200Uncharacterized protein. (251 aa)
RIR_1902000ATP dependent DNA helicase. (1041 aa)
RIR_1911600Serine/threonine protein kinase, putative; Belongs to the protein kinase superfamily. (438 aa)
RIR_1977500ATP dependent DNA helicase. (1408 aa)
RIR_1978600Pho85 cyclin of the pcl1,2-like subfamily; Belongs to the cyclin family. (170 aa)
RIR_1981200G1/S-specific cyclin pcl5. (446 aa)
RIR_1997200Protein kinase domain-containing protein. (540 aa)
RIR_1991400Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (483 aa)
RIR_2042400Protein kinase domain-containing protein. (544 aa)
RIR_2045900Cell cycle arrest in response to pheromone-related protein. (548 aa)
RIR_2063900Putative RAD51-like protein 3. (317 aa)
RIR_2066400Protein kinase domain-containing protein. (311 aa)
RIR_2116200Protein kinase domain-containing protein. (489 aa)
RIR_2137000ATP-dependent DNA helicase recq. (321 aa)
RIR_2137100ATP-dependent DNA helicase q-like 4a. (244 aa)
RIR_2136900Uncharacterized protein. (203 aa)
RIR_2170000ATP dependent DNA helicase. (509 aa)
RIR_2170700Uncharacterized protein. (193 aa)
RIR_2189700Flap endonuclease-1. (632 aa)
RIR_2299400ATP dependent DNA helicase. (401 aa)
RIR_2299500ATP-dependent helicase. (295 aa)
RIR_2299300Cytochrome c domain-containing protein. (598 aa)
RIR_2314700Ubiquitin domain-containing protein. (327 aa)
RIR_2315400Ubiquitin domain-containing protein. (323 aa)
RIR_2328400ATP dependent DNA helicase. (1018 aa)
RIR_2328300Uncharacterized protein. (342 aa)
RIR_2346600Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (123 aa)
RIR_2352400Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (488 aa)
RIR_2389500Ubiquitin C. (168 aa)
RIR_2409500Serine/threonine protein kinase. (161 aa)
RIR_2445500Putative DNA/RNA helicase sen1. (84 aa)
RIR_2470500Ubiquitin-conjugating enzyme E2 D; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
RIR_2536600Serine/threonine protein kinase. (761 aa)
RIR_2545400Bloom syndrome protein. (1359 aa)
RIR_2559000Structure-specific endonuclease subunit slx4-like. (205 aa)
RIR_2563300RAD50-like DNA repair protein. (1273 aa)
RIR_2605000Uncharacterized protein. (206 aa)
RIR_2604900ATP dependent DNA helicase. (1027 aa)
RIR_2635000Protein kinase domain-containing protein. (270 aa)
RIR_2657700Recq mediated genome instability protein rmi1. (725 aa)
RIR_2663600G1/S-specific cyclin pcl5. (412 aa)
RIR_2680900Uncharacterized protein. (100 aa)
RIR_2732900ATP dependent DNA helicase. (1839 aa)
RIR_2758500Ubiquitin domain-containing protein. (329 aa)
RIR_2800300Uncharacterized protein. (532 aa)
RIR_2800200ATP-dependent DNA helicase recq. (266 aa)
RIR_2818300ATPase aaa. (1310 aa)
RIR_2873700DNA repair and recombination protein RAD52. (513 aa)
RIR_2879500Histone H2B; Belongs to the histone H2B family. (175 aa)
RIR_2881310Histone H2B; Belongs to the histone H2B family. (171 aa)
RIR_2883610JEMT01029276.1_cds_EXX52577.1_27452: PROVISIONAL. (131 aa)
RIR_2973900Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (411 aa)
RIR_3113100DNA polymerase delta subunit 4. (170 aa)
RIR_3130200ATP dependent DNA helicase. (1422 aa)
RIR_3183700Uncharacterized protein. (678 aa)
RIR_3183800ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (645 aa)
RIR_3195900G1/S-specific cyclin pcl5. (207 aa)
RIR_3245400Serine/threonine protein kinase. (462 aa)
RIR_3251500DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (4061 aa)
RIR_3313300Crossover junction endonuclease MUS81. (605 aa)
RIR_3327300ATP dependent DNA helicase. (1408 aa)
RIR_3381900Uncharacterized protein. (160 aa)
RIR_3382000ATP dependent DNA helicase. (1238 aa)
RIR_3406400Protein kinase domain-containing protein. (547 aa)
RIR_3481200DNA repair protein xrcc3-like. (214 aa)
RIR_3535800Uncharacterized protein. (88 aa)
RIR_3535810JEMT01027768.1_cds_EXX56255.1_23736: PROVISIONAL. (77 aa)
RIR_1930000Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (449 aa)
RIR_2593800DNA polymerase delta subunit 4. (194 aa)
RIR_3024400Kinase-like domain-containing protein; Belongs to the protein kinase superfamily. (394 aa)
RIR_1721400Ubiquitin domain-containing protein. (318 aa)
RIR_1969100Metallo-dependent phosphatase-like protein. (869 aa)
GLOINDRAFT_999Tyrosyl-DNA phosphodiesterase 1. (512 aa)
RIR_3070300Ml domain-containing protein. (457 aa)
RIR_2506300Ubiquitin-conjugating protein dma1. (460 aa)
RIR_2216700Topoisomerase 1-associated factor 1. (683 aa)
RIR_2680910Tis13_83420. (158 aa)
RIR_3456410Tis13_99714: PROVISIONAL. (277 aa)
RIR_3505500Small ubiquitin-related modifier. (98 aa)
RIR_2500100Cyclin. (273 aa)
RIR_0169900Cyclin-dependent protein kinase regulator pho80. (203 aa)
RIR_1796410Tis13_36087. (176 aa)
RIR_0185400Zf-c2h2 type zinc finger protein/uba domain protein. (317 aa)
RIR_3117700Poly [ADP-ribose] polymerase. (718 aa)
RIR_1192700BTB_2 domain-containing protein. (296 aa)
RIR_3505200Ubiquitin domain-containing protein. (402 aa)
RIR_0284610Tis13_324016. (149 aa)
RIR_2168910Tis13_96951: PROVISIONAL. (101 aa)
RIR_1577610Tis13_26237: PROVISIONAL. (102 aa)
GLOINDRAFT_287DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (498 aa)
RIR_0218300Uncharacterized protein. (621 aa)
RIR_2446500ATP-dependent helicase. (1290 aa)
RIR_2452000Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (619 aa)
RIR_1796420Tis13_2662: PROVISIONAL. (96 aa)
RIR_3444400Ubiquitin 1, putative. (374 aa)
RIR_2434700Putative DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. (931 aa)
RIR_2873900K+ channel tetramerisation domain containing protein. (422 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
Server load: low (30%) [HD]