STRINGSTRING
RIR_2638100 RIR_2638100 RIR_0161300 RIR_0161300 RIR_0163500 RIR_0163500 RIR_0174100 RIR_0174100 RIR_0179200 RIR_0179200 RIR_0207100 RIR_0207100 RIR_0301200 RIR_0301200 RIR_0426700 RIR_0426700 RIR_0402000 RIR_0402000 RIR_0513200 RIR_0513200 RIR_0570900 RIR_0570900 RIR_0651600 RIR_0651600 RIR_0669800 RIR_0669800 RIR_0669700 RIR_0669700 RIR_0677800 RIR_0677800 RIR_0846800 RIR_0846800 RIR_0944900 RIR_0944900 RIR_1023300 RIR_1023300 RIR_1063600 RIR_1063600 RIR_1118200 RIR_1118200 RIR_1283800 RIR_1283800 RIR_1419800 RIR_1419800 RIR_1594400 RIR_1594400 RIR_1808900 RIR_1808900 RIR_1810000 RIR_1810000 RIR_1963900 RIR_1963900 RIR_1987600 RIR_1987600 RIR_2065500 RIR_2065500 RIR_2152420 RIR_2152420 RIR_2314700 RIR_2314700 RIR_2315400 RIR_2315400 RIR_2389500 RIR_2389500 RIR_2536600 RIR_2536600 RIR_2540400 RIR_2540400 RIR_2563200 RIR_2563200 RIR_2577000 RIR_2577000 RIR_2579900 RIR_2579900 RIR_2593600 RIR_2593600 RIR_2758500 RIR_2758500 RIR_2774000 RIR_2774000 RIR_2850500 RIR_2850500 RIR_3083300 RIR_3083300 RIR_3084600 RIR_3084600 RIR_3266100 RIR_3266100 RIR_3266400 RIR_3266400 RIR_1721400 RIR_1721400 RIR_1986400 RIR_1986400 RIR_1379700 RIR_1379700 RIR_2511000 RIR_2511000 RIR_1164500 RIR_1164500 RIR_1375000 RIR_1375000 RIR_0156500 RIR_0156500 RIR_3505200 RIR_3505200 RIR_2064400 RIR_2064400 RIR_2969900 RIR_2969900 RIR_3444400 RIR_3444400 RIR_3456300 RIR_3456300 RIR_0194300 RIR_0194300 RIR_0650910 RIR_0650910 RIR_0650810 RIR_0650810 RIR_0650900 RIR_0650900
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_2638100Probable maltase-glucoamylase 2: PROVISIONAL. (429 aa)
RIR_0161300Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1650 aa)
RIR_0163500Kxdl motif-containing protein 1 isoform x1. (125 aa)
RIR_0174100Cop9 signalosome complex subunit 1. (441 aa)
RIR_0179200Cyclin protein kinase; Belongs to the cyclin family. (355 aa)
RIR_0207100DNA-directed RNA polymerase II subunit RPB11. (248 aa)
RIR_0301200Ubiquitin domain-containing protein. (317 aa)
RIR_0426700COP9 signalosome complex subunit 4. (295 aa)
RIR_0402000COP9 signalosome complex subunit 5. (352 aa)
RIR_0513200Cop9 signalosome complex subunit 7. (297 aa)
RIR_0570900Peptidyl prolyl cis-trans isomerase Cyclophilin. (190 aa)
RIR_0651600DNA-directed RNA polymerase II subunit RPB4. (144 aa)
RIR_0669800DNA excision repair protein ERCC-3. (484 aa)
RIR_0669700DNA excision repair protein ERCC-3. (319 aa)
RIR_0677800Ubiquitin-ribosomal 40S subunit protein S31 fusion protein. (164 aa)
RIR_0846800DNA-directed RNA polymerases I, II, and III subunit RPABC5. (99 aa)
RIR_0944900DNA-directed RNA polymerase I, II, and III subunit rpb10. (239 aa)
RIR_1023300Zinc finger protein 830. (447 aa)
RIR_1063600Ubiquitin C. (381 aa)
RIR_1118200RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH subunit TFB4. (276 aa)
RIR_1283800RING-box protein 1. (109 aa)
RIR_1419800DNA-directed RNA polymerases I, II, and III subunit RPABC2. (178 aa)
RIR_1594400RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (495 aa)
RIR_1808900Ubiquitin-related domain-containing protein. (305 aa)
RIR_1810000COP9 signalosome complex subunit 8. (227 aa)
RIR_1963900Transcription initiation factor TFIIH subunit 1. (897 aa)
RIR_1987600Cullin-4B-like; Belongs to the cullin family. (843 aa)
RIR_2065500Uv-damaged DNA binding protein. (1139 aa)
RIR_2152420JEMT01017528.1_cds_EXX67821.1_12201. (70 aa)
RIR_2314700Ubiquitin domain-containing protein. (327 aa)
RIR_2315400Ubiquitin domain-containing protein. (323 aa)
RIR_2389500Ubiquitin C. (168 aa)
RIR_2536600Serine/threonine protein kinase. (761 aa)
RIR_2540400DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1268 aa)
RIR_2563200COP9 signalosome complex subunit 6. (339 aa)
RIR_2577000RNA polymerase II transcription repair factor TFIIH subunit TFB3. (303 aa)
RIR_2579900DNA-directed RNA polymerase II subunit RPB4. (123 aa)
RIR_2593600Cyclin-dependent kinase 7. (309 aa)
RIR_2758500Ubiquitin domain-containing protein. (329 aa)
RIR_2774000DNA-directed RNA polymerase I, II, and III subunit rpb10. (239 aa)
RIR_2850500DNA-directed RNA polymerase II subunit RPB7. (179 aa)
RIR_3083300Nrde-2 family protein. (850 aa)
RIR_3084600Integrator complex subunit 10-like. (882 aa)
RIR_3266100DNA-directed RNA polymerase II subunit RPB3. (301 aa)
RIR_3266400COP9 signalosome complex subunit 3. (459 aa)
RIR_1721400Ubiquitin domain-containing protein. (318 aa)
RIR_1986400DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1861 aa)
RIR_1379700DNA-directed RNA polymerases I, II, and III subunit RPABC3. (172 aa)
RIR_2511000Subunit Tfb5 transcription factor TFIIH complex. (72 aa)
RIR_1164500General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (412 aa)
RIR_1375000DNA-directed RNA polymerases I, II, and III subunit RPABC4. (77 aa)
RIR_0156500Rad3/XPD DNA repair helicase. (760 aa)
RIR_3505200Ubiquitin domain-containing protein. (402 aa)
RIR_2064400Transcription Elongation factor S-II. (141 aa)
RIR_2969900DNA-directed RNA polymerase II subunit RPB9; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (192 aa)
RIR_3444400Ubiquitin 1, putative. (374 aa)
RIR_3456300COP9 signalosome complex subunit 2. (442 aa)
RIR_0194300DNA-directed RNA polymerase I, II and III subunit Rpb5. (218 aa)
RIR_0650910Tis13_334802. (85 aa)
RIR_0650810Tis13_83977. (148 aa)
RIR_0650900RNA polymerase beta subunit-domain-containing protein. (160 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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