STRINGSTRING
RIR_2389500 RIR_2389500 RIR_2315400 RIR_2315400 RIR_2314700 RIR_2314700 RIR_2073200 RIR_2073200 RIR_1964800 RIR_1964800 RIR_1930700 RIR_1930700 RIR_1803900 RIR_1803900 RIR_0677800 RIR_0677800 RIR_0718900 RIR_0718900 RIR_1063600 RIR_1063600 RIR_1803800 RIR_1803800 RIR_1808900 RIR_1808900 RIR_0301200 RIR_0301200 RIR_0163500 RIR_0163500 RIR_2452000 RIR_2452000 RIR_3444400 RIR_3444400 RIR_0367400 RIR_0367400 SLX1 SLX1 RIR_3505200 RIR_3505200 RIR_1721400 RIR_1721400 RIR_3475700 RIR_3475700 RIR_2758500 RIR_2758500 RIR_2559000 RIR_2559000 RIR_2536600 RIR_2536600
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_2389500Ubiquitin C. (168 aa)
RIR_2315400Ubiquitin domain-containing protein. (323 aa)
RIR_2314700Ubiquitin domain-containing protein. (327 aa)
RIR_2073200Serine/threonine-protein phosphatase. (2256 aa)
RIR_1964800E3 ubiquitin-protein ligase FANCL. (363 aa)
RIR_1930700DNA cross-link repair 1A protein. (757 aa)
RIR_1803900Asparagine-tRNA ligase. (67 aa)
RIR_0677800Ubiquitin-ribosomal 40S subunit protein S31 fusion protein. (164 aa)
RIR_0718900Uncharacterized protein. (185 aa)
RIR_1063600Ubiquitin C. (381 aa)
RIR_1803800Asparaginyl-tRNA synthetase. (431 aa)
RIR_1808900Ubiquitin-related domain-containing protein. (305 aa)
RIR_0301200Ubiquitin domain-containing protein. (317 aa)
RIR_0163500Kxdl motif-containing protein 1 isoform x1. (125 aa)
RIR_2452000Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (619 aa)
RIR_3444400Ubiquitin 1, putative. (374 aa)
RIR_0367400Fanconi anemia group D2 protein. (1511 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (313 aa)
RIR_3505200Ubiquitin domain-containing protein. (402 aa)
RIR_1721400Ubiquitin domain-containing protein. (318 aa)
RIR_3475700Nuclear transport factor 2. (118 aa)
RIR_2758500Ubiquitin domain-containing protein. (329 aa)
RIR_2559000Structure-specific endonuclease subunit slx4-like. (205 aa)
RIR_2536600Serine/threonine protein kinase. (761 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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