STRINGSTRING
RIR_3266500 RIR_3266500 RIR_2682900 RIR_2682900 RIR_2675200 RIR_2675200 RIR_2536600 RIR_2536600 RIR_2515800 RIR_2515800 RIR_2512100 RIR_2512100 RIR_2389500 RIR_2389500 RIR_2338000 RIR_2338000 RIR_2315400 RIR_2315400 RIR_2314700 RIR_2314700 RIR_2173900 RIR_2173900 RIR_1808900 RIR_1808900 RIR_1239700 RIR_1239700 RIR_1063600 RIR_1063600 RIR_1032800 RIR_1032800 RIR_0853500 RIR_0853500 RIR_0848100 RIR_0848100 RIR_0677800 RIR_0677800 RIR_0500400 RIR_0500400 RIR_0301200 RIR_0301200 RIR_0163500 RIR_0163500 RIR_3505200 RIR_3505200 RIR_3444400 RIR_3444400 RIR_3268800 RIR_3268800 RIR_1984000 RIR_1984000 RIR_1988100 RIR_1988100 RIR_1967700 RIR_1967700 RIR_1955400 RIR_1955400 RIR_1567900 RIR_1567900 RIR_1721400 RIR_1721400 RIR_2758500 RIR_2758500
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_3266500Magnesium dependent phosphatase. (204 aa)
RIR_2682900High osmolarity signaling protein sho1. (226 aa)
RIR_2675200Late endosome to vacuole transport-related protein, putative. (482 aa)
RIR_2536600Serine/threonine protein kinase. (761 aa)
RIR_2515800Zinc finger, fyve domain containing protein. (203 aa)
RIR_2512100Charged multivesicular body protein 5. (220 aa)
RIR_2389500Ubiquitin C. (168 aa)
RIR_2338000Charged multivesicular body protein 3. (212 aa)
RIR_2315400Ubiquitin domain-containing protein. (323 aa)
RIR_2314700Ubiquitin domain-containing protein. (327 aa)
RIR_2173900ESCRT-I complex subunit TSG101. (451 aa)
RIR_1808900Ubiquitin-related domain-containing protein. (305 aa)
RIR_1239700Charged multivesicular body protein 7. (533 aa)
RIR_1063600Ubiquitin C. (381 aa)
RIR_1032800ESCRT-II complex subunit VPS25. (168 aa)
RIR_0853500Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (246 aa)
RIR_0848100SHO1 osmosensor. (308 aa)
RIR_0677800Ubiquitin-ribosomal 40S subunit protein S31 fusion protein. (164 aa)
RIR_0500400Charged multivesicular body protein 4. (220 aa)
RIR_0301200Ubiquitin domain-containing protein. (317 aa)
RIR_0163500Kxdl motif-containing protein 1 isoform x1. (125 aa)
RIR_3505200Ubiquitin domain-containing protein. (402 aa)
RIR_3444400Ubiquitin 1, putative. (374 aa)
RIR_3268800Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (241 aa)
RIR_1984000Charged multivesicular body protein 2A. (220 aa)
RIR_1988100Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (700 aa)
RIR_1967700Charged multivesicular body protein 6. (167 aa)
RIR_1955400ESCRT-II complex subunit VPS36. (516 aa)
RIR_1567900Williams-beuren syndrome critical region. (189 aa)
RIR_1721400Ubiquitin domain-containing protein. (318 aa)
RIR_2758500Ubiquitin domain-containing protein. (329 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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