STRINGSTRING
RIR_1350700 RIR_1350700 RIR_3444400 RIR_3444400 RIR_2515600 RIR_2515600 RIR_3505200 RIR_3505200 RIR_1721400 RIR_1721400 RIR_3298200 RIR_3298200 RIR_2758500 RIR_2758500 RIR_2558400 RIR_2558400 RIR_2536600 RIR_2536600 RIR_2470500 RIR_2470500 RIR_2389500 RIR_2389500 RIR_2315400 RIR_2315400 RIR_2314700 RIR_2314700 RIR_1808900 RIR_1808900 RIR_1752500 RIR_1752500 RIR_1063600 RIR_1063600 RIR_0677800 RIR_0677800 RIR_0301200 RIR_0301200 RIR_0163500 RIR_0163500 RIR_0192400 RIR_0192400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_1350700Thij/pfpi family transcriptional regulator. (215 aa)
RIR_3444400Ubiquitin 1, putative. (374 aa)
RIR_2515600EF-hand calcium-binding protein, Caltractin-cdc31 subfamily. (179 aa)
RIR_3505200Ubiquitin domain-containing protein. (402 aa)
RIR_1721400Ubiquitin domain-containing protein. (318 aa)
RIR_3298200Putative ubiquitin-conjugating enzyme E2. (138 aa)
RIR_2758500Ubiquitin domain-containing protein. (329 aa)
RIR_2558400Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
RIR_2536600Serine/threonine protein kinase. (761 aa)
RIR_2470500Ubiquitin-conjugating enzyme E2 D; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
RIR_2389500Ubiquitin C. (168 aa)
RIR_2315400Ubiquitin domain-containing protein. (323 aa)
RIR_2314700Ubiquitin domain-containing protein. (327 aa)
RIR_1808900Ubiquitin-related domain-containing protein. (305 aa)
RIR_1752500ThiJ/PfpI family transcriptional regulator. (192 aa)
RIR_1063600Ubiquitin C. (381 aa)
RIR_0677800Ubiquitin-ribosomal 40S subunit protein S31 fusion protein. (164 aa)
RIR_0301200Ubiquitin domain-containing protein. (317 aa)
RIR_0163500Kxdl motif-containing protein 1 isoform x1. (125 aa)
RIR_0192400Dynein light intermediate chain-domain-containing protein. (591 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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