STRINGSTRING
RIR_2843400 RIR_2843400 RIR_3444400 RIR_3444400 GLOIN_2v895039 GLOIN_2v895039 RIR_0825200 RIR_0825200 RIR_3505200 RIR_3505200 RIR_0493800 RIR_0493800 RIR_3207400 RIR_3207400 RIR_1721400 RIR_1721400 RIR_2758500 RIR_2758500 RIR_2536600 RIR_2536600 RIR_2389500 RIR_2389500 RIR_2315400 RIR_2315400 RIR_2314700 RIR_2314700 RIR_1808900 RIR_1808900 RIR_1179200 RIR_1179200 RIR_1063600 RIR_1063600 RIR_0024410 RIR_0024410 RIR_0163500 RIR_0163500 RIR_0301200 RIR_0301200 RIR_0677800 RIR_0677800 RIR_0858200 RIR_0858200 RIR_0918400 RIR_0918400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIR_2843400Palmitoyltransferase complex subunit erf4. (298 aa)
RIR_3444400Ubiquitin 1, putative. (374 aa)
GLOIN_2v895039Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. (224 aa)
RIR_0825200Acyl-protein thioesterase 1. (234 aa)
RIR_3505200Ubiquitin domain-containing protein. (402 aa)
RIR_0493800Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (676 aa)
RIR_3207400Prenyl-dependent CAAX protease. (329 aa)
RIR_1721400Ubiquitin domain-containing protein. (318 aa)
RIR_2758500Ubiquitin domain-containing protein. (329 aa)
RIR_2536600Serine/threonine protein kinase. (761 aa)
RIR_2389500Ubiquitin C. (168 aa)
RIR_2315400Ubiquitin domain-containing protein. (323 aa)
RIR_2314700Ubiquitin domain-containing protein. (327 aa)
RIR_1808900Ubiquitin-related domain-containing protein. (305 aa)
RIR_1179200Protein farnesyltransferase/ geranylgeranyltransferase type-1 subunit alpha. (270 aa)
RIR_1063600Ubiquitin C. (381 aa)
RIR_0024410Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (451 aa)
RIR_0163500Kxdl motif-containing protein 1 isoform x1. (125 aa)
RIR_0301200Ubiquitin domain-containing protein. (317 aa)
RIR_0677800Ubiquitin-ribosomal 40S subunit protein S31 fusion protein. (164 aa)
RIR_0858200ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family. (168 aa)
RIR_0918400Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. (219 aa)
Your Current Organism:
Rhizophagus irregularis DAOM181602DAOM
NCBI taxonomy Id: 747089
Other names: Glomus cf. irregulare DAOM 197198, Glomus irregulare DAOM 197198, Glomus irregulare DAOM-197198, Glomus irregulare DAOM197198, Glomus sp. DAOM 197198, R. irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 181602, Rhizophagus irregularis DAOM 181602=DAOM 197198, Rhizophagus irregularis DAOM 197198
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