STRINGSTRING
recF recF AEE13657.1 AEE13657.1 AEE13658.1 AEE13658.1 AEE13659.1 AEE13659.1 AEE13661.1 AEE13661.1 AEE13662.1 AEE13662.1 AEE13663.1 AEE13663.1 AEE13664.1 AEE13664.1 AEE13665.1 AEE13665.1 AEE13666.1 AEE13666.1 AEE13667.1 AEE13667.1 AEE13668.1 AEE13668.1 fliP fliP cheB cheB AEE13671.1 AEE13671.1 AEE13672.1 AEE13672.1 cheD cheD AEE13674.1 AEE13674.1 AEE13675.1 AEE13675.1 flhB flhB AEE13677.1 AEE13677.1 AEE13678.1 AEE13678.1 AEE13679.1 AEE13679.1 AEE13680.1 AEE13680.1 AEE13681.1 AEE13681.1 AEE13682.1 AEE13682.1 AEE13684.1 AEE13684.1 AEE13697.1 AEE13697.1 AEE13817.1 AEE13817.1 AEE13818.1 AEE13818.1 AEE13819.1 AEE13819.1 AEE13820.1 AEE13820.1 AEE13822.1 AEE13822.1 csrA csrA AEE13824.1 AEE13824.1 AEE13825.1 AEE13825.1 AEE13826.1 AEE13826.1 AEE13827.1 AEE13827.1 AEE13833.1 AEE13833.1 AEE13834.1 AEE13834.1 AEE13858.1 AEE13858.1 AEE13890.1 AEE13890.1 AEE13911.1 AEE13911.1 AEE13967.1 AEE13967.1 AEE14061.1 AEE14061.1 AEE14090.1 AEE14090.1 AEE14199.1 AEE14199.1 AEE14443.1 AEE14443.1 AEE14507.1 AEE14507.1 AEE14528.1 AEE14528.1 AEE14537.1 AEE14537.1 AEE14659.1 AEE14659.1 AEE14672.1 AEE14672.1 AEE14694.1 AEE14694.1 AEE14726.1 AEE14726.1 AEE14747.1 AEE14747.1 AEE14749.1 AEE14749.1 AEE14794.1 AEE14794.1 AEE14824.1 AEE14824.1 AEE14825.1 AEE14825.1 AEE14826.1 AEE14826.1 AEE14827.1 AEE14827.1 AEE14884.1 AEE14884.1 AEE14927.1 AEE14927.1 AEE15057.1 AEE15057.1 AEE15120.1 AEE15120.1 AEE15187.1 AEE15187.1 AEE15188.1 AEE15188.1 AEE15224.1 AEE15224.1 flhA flhA AEE15295.1 AEE15295.1 AEE15296.1 AEE15296.1 AEE15297.1 AEE15297.1 AEE15298.1 AEE15298.1 fliW fliW AEE15300.1 AEE15300.1 AEE15301.1 AEE15301.1 flgI flgI AEE15306.1 AEE15306.1 AEE15307.1 AEE15307.1 AEE15308.1 AEE15308.1 AEE15309.1 AEE15309.1 AEE15314.1 AEE15314.1 AEE15315.1 AEE15315.1 AEE15316.1 AEE15316.1 AEE15366.1 AEE15366.1 AEE15406.1 AEE15406.1 AEE15414.1 AEE15414.1 AEE15415.1 AEE15415.1 AEE15416.1 AEE15416.1 AEE15418.1 AEE15418.1 AEE15419.1 AEE15419.1 AEE15421.1 AEE15421.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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recFDNA replication and repair protein recF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. (323 aa)
AEE13657.1Protein of unknown function DUF721; InterPro IPR007922; KEGG: ddf:DEFDS_0268 hypothetical protein; PFAM: Protein of unknown function DUF721; SPTR: Putative uncharacterized protein; IMG reference gene:2504783367; PFAM: Protein of unknown function (DUF721). (146 aa)
AEE13658.1COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR003594:IPR013506:IPR006171:IPR002288:IPR 001241; KEGG: tit:Thit_0010 DNA gyrase, B subunit; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; SPTR: DNA gyrase, B subunit; IMG reference gene:2504783368; PFAM: Toprim domain; Histidine kinase-, DNA gyras [...] (632 aa)
AEE13659.1COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR005743:IPR002205:IPR006691; KEGG: DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; SPTR: DNA gyrase, A subunit; TIGRFAM: DNA gyrase, subunit A; IMG reference gene:2504783369; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A [...] (804 aa)
AEE13661.1Type IV pilus assembly PilZ; COGs: COG5581 glycosyltransferase; InterPro IPR009875; KEGG: ate:Athe_2150 type IV pilus assembly PilZ; PFAM: Type IV pilus assembly PilZ; SPTR: Type IV pilus assembly PilZ; IMG reference gene:2504783371; PFAM: PilZ domain. (246 aa)
AEE13662.1COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterPro IPR014284:IPR012845:IPR007627:IPR007630; KEGG: aoe:Clos_1510 RNA polymerase, sigma 28 subunit, FliA/WhiG; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; IMG reference gene:2504783372; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family. (223 aa)
AEE13663.1Protein of unknown function DUF342; COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: cob:COB47_1924 hypothetical protein; PFAM: Protein of unknown function DUF342; SPTR: Putative uncharacterized protein; IMG reference gene:2504783373; PFAM: Protein of unknown function (DUF342). (452 aa)
AEE13664.1MgtE intracellular region; InterPro IPR006668; KEGG: tmt:Tmath_1281 MgtE intracellular region; PFAM: Magnesium transporter, MgtE intracellular region; SPTR: Putative uncharacterized protein; IMG reference gene:2504783374; PFAM: MgtE intracellular N domain. (168 aa)
AEE13665.1OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: mta:Moth_1741 OmpA/MotB; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA/MotB domain protein; IMG reference gene:2504783375; PFAM: OmpA family. (243 aa)
AEE13666.1Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (159 aa)
AEE13667.1COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: toc:Toce_1111 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; IMG reference gene:2504783377; PFAM: Response regulator receiver domain. (119 aa)
AEE13668.1Hypothetical protein; IMG reference gene:2504783378; PFAM: Flagellar biosynthesis protein, FliO. (292 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (248 aa)
cheBResponse regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (343 aa)
AEE13671.1MCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: cbb:CLD_1825 chemotaxis protein methyltransferase CheR; PFAM: MCP methyltransferase, CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase, CheR-type; SPTR: Chemotaxis protein methyltransferase, CheR; IMG reference gene:2504783381; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain. (260 aa)
AEE13672.1COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: tit:Thit_1208 CheC, inhibitor of MCP methylation; PFAM: CheC-like protein; SPTR: CheC-like family protein; IMG reference gene:2504783382; PFAM: CheC-like family. (202 aa)
cheDCheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (156 aa)
AEE13674.1Export protein FliQ family 3; COGs: COG1987 Flagellar biosynthesis pathway component FliQ; InterPro IPR002191; KEGG: cvi:CV_3125 flagellar biosynthetic protein FliQ; PFAM: Bacterial export protein FliQ, family 3; SPTR: Flagellar biosynthetic protein FliQ; IMG reference gene:2504783384; PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ. (89 aa)
AEE13675.1Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (256 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (349 aa)
AEE13677.1Hypothetical protein; IMG reference gene:2504783388. (86 aa)
AEE13678.1Hypothetical protein; IMG reference gene:2504783389. (137 aa)
AEE13679.1CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: dma:DMR_20770 chemotaxis protein CheW; PFAM: CheW-like protein; SMART: CheW-like protein; SPTR: CheW protein; IMG reference gene:2504783390; PFAM: CheW-like domain. (162 aa)
AEE13680.1CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207:IPR010808:IPR004105:IPR003594:IPR 002545; KEGG: mta:Moth_0742 CheA signal transduction histidine kinases; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, P2 response regulator-binding; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction histidine kinase, subgroup, homodimeric; CheW-like protein; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPa [...] (682 aa)
AEE13681.1Metal dependent phosphohydrolase; COGs: COG1639 signal transduction protein; InterPro IPR006675:IPR013976:IPR003607; KEGG: cbi:CLJ_B1646 HDIG domain protein; PFAM: Metal-dependent hydrolase HDOD; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: HDIG domain protein; TIGRFAM: HDIG; IMG reference gene:2504783392; PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG. (289 aa)
AEE13682.1Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (134 aa)
AEE13684.1Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160:IPR004010:IPR013767; KEGG: has:Halsa_0861 diguanylate cyclase and metal dependent phosphohydrolase; PFAM: Diguanylate cyclase, predicted; PAS fold; Cache; SMART: Diguanylate cyclase, predicted; PAS; SPTR: Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504783395; PFAM: Cache domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (659 aa)
AEE13697.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: dma:DMR_07730 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis sensory transducer; IMG reference gene:2504783408; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (728 aa)
AEE13817.1Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (553 aa)
AEE13818.1KEGG: gwc:GWCH70_3016 flagellar protein FlaG; SPTR: Flagellar protein FlaG protein; IMG reference gene:2504783535; PFAM: FlaG protein. (136 aa)
AEE13819.1Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (597 aa)
AEE13820.1Flagellar protein FliS; COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: dal:Dalk_0645 flagellar protein FliS; PFAM: Flagellar protein FliS; SPTR: Flagellar protein FliS; TIGRFAM: Flagellar protein FliS; IMG reference gene:2504783537; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS. (128 aa)
AEE13822.1Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674:IPR003607; KEGG: nth:Nther_2138 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Metal dependent phosphohydrolase; IMG reference gene:2504783539; PFAM: HD domain. (372 aa)
csrACarbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (79 aa)
AEE13824.1Hypothetical protein; KEGG: ddf:DEFDS_0524 flagellar assembly protein FliH; SPTR: Flagellar assembly protein H; IMG reference gene:2504783541. (222 aa)
AEE13825.1ATPase, FliI/YscN family; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR005714:IPR004100:IPR000194:IPR003593; KEGG: cth:Cthe_0468 flagellar protein export ATPase FliI; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; PRIAM: H(+)-transporting two-sector ATPase; SMART: ATPase, AAA+ type, core; SPTR: Type III secretion system ATPase, FliI/YscN; TIGRFAM: ATPase, type III secretion system, FliI/YscN; IMG reference gene:2504783542; PFAM: ATP synthase alpha/beta family [...] (435 aa)
AEE13826.1GTP-binding signal recognition particle SRP54 G- domain protein; COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR000897:IPR003593; KEGG: ddf:DEFDS_0415 flagellar biosynthesis protein FlhF; PFAM: Signal recognition particle, SRP54 subunit, GTPase; SMART: ATPase, AAA+ type, core; SPTR: Flagellar biosynthesis protein FlhF; IMG reference gene:2504783543; PFAM: SRP54-type protein, GTPase domain. (352 aa)
AEE13827.1Cobyrinic acid ac-diamide synthase; COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: slp:Slip_0975 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; IMG reference gene:2504783544; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. (328 aa)
AEE13833.1Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dtu:Dtur_1236 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SPTR: PAS/PAC sensor signal transduction histidine kinase; IMG reference gene:2504783550; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A [...] (301 aa)
AEE13834.1Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ttm:Tthe_2686 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family; IMG reference gene:2504783551; PFAM: Response regulator [...] (224 aa)
AEE13858.1Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004010:IPR003660:IPR004089; KEGG: toc:Toce_0469 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis sensory transducer with Cache sensor; IMG reference gene:2504783575; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (735 aa)
AEE13890.1Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674:IPR003607; KEGG: slp:Slip_2166 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Metal dependent phosphohydrolase; IMG reference gene:2504783610; PFAM: HD domain. (409 aa)
AEE13911.1Metal dependent phosphohydrolase with GAF sensor; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR003660:IPR003018:IPR006674:IPR003607; KEGG: drm:Dred_3089 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; GAF; HAMP linker domain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Metal dependent phosphohydrolase; IMG reference gene:2504783632; PFAM: HAMP domain; HD domain; GAF domain. (878 aa)
AEE13967.1Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160; KEGG: dau:Daud_0417 diguanylate cyclase with PAS/PAC sensor; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504783697; PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (638 aa)
AEE14061.1Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR000014:IPR000160:IPR001633:IPR013767:IPR 003018:IPR013655; KEGG: nis:NIS_0136 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; GAF; PAS fold; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504783796; PFA [...] (847 aa)
AEE14090.1Diguanylate cyclase; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Response regulator receiver modulated diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504783828; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (426 aa)
AEE14199.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: ckr:CKR_0361 hypothetical protein; PFAM: HAMP linker domain; Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative uncharacterized protein; IMG reference gene:2504783941; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (741 aa)
AEE14443.1Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG2200 FOG: EAL domain; InterPro IPR013767:IPR000160:IPR001633:IPR000014; KEGG: saf:SULAZ_0401 PAS fold family protein; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; SPTR: PAS fold family protein; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784203; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (842 aa)
AEE14507.1Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR013767:IPR000160:IPR001633:IPR000014; KEGG: afe:Lferr_2664 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S); TIGRFAM: Diguanylate cyclase, predicted; PAS [...] (894 aa)
AEE14528.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: cni:Calni_1776 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504784292; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (297 aa)
AEE14537.1Diguanylate cyclase with PAS/PAC and GAF sensors; COGs: COG2199 FOG: GGDEF domain; InterPro IPR003018:IPR013767:IPR000160:IPR000014; KEGG: tte:TTE1100 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; SMART: Diguanylate cyclase, predicted; GAF; PAS; SPTR: Putative diguanylate cyclase/phosphodiesterase; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784302; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (897 aa)
AEE14659.1Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006675:IPR003607:IPR006674; KEGG: metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Metal dependent phosphohydrolase; TIGRFAM: HDIG; IMG reference gene:2504784427; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG. (396 aa)
AEE14672.1COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR001789; KEGG: dma:DMR_04980 response regulator receiver protein; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SPTR: Response regulator receiver modulated diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504784440; PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase [...] (412 aa)
AEE14694.1Hypothetical protein; Manually curated; IMG reference gene:2504784470; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (721 aa)
AEE14726.1Diguanylate phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: abu:Abu_0830 EAL domain-containing protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted; SPTR: EAL domain protein; IMG reference gene:2504784503; PFAM: EAL domain. (357 aa)
AEE14747.1Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); COGs: COG2200 FOG: EAL domain; InterProIPR000014:IPR000160:IPR001610:IPR001633:IPR 013655:IPR013767:IPR003018; KEGG: ddf:DEFDS_1856 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; PAS fold-3; GAF; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784532; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRF [...] (1160 aa)
AEE14749.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: aar:Acear_1996 diguanylate cyclase with PAS/PAC sensor; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504784535; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (294 aa)
AEE14794.1Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160:IPR013767; KEGG: afr:AFE_3057 sensory box-containing diguanylate cyclase, putative; PFAM: Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate cyclase, predicted; PAS; SPTR: Sensory box-containing diguanylate cyclase, putative; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784582; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (588 aa)
AEE14824.1Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR019734:IPR001440; KEGG: mar:MAE_03610 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide repeat protein; IMG reference gene:2504784613; PFAM: Tetratricopeptide repeat. (204 aa)
AEE14825.1Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterProIPR000014:IPR000160:IPR001610:IPR013656:IPR 013767; KEGG: chy:CHY_0880 response regulator/sensory box protein/GGDEF domain-containing protein; PFAM: Diguanylate cyclase, predicted; PAS fold; PAS fold-4; PRIAM: Diguanylate kinase; SMART: Diguanylate cyclase, predicted; PAC motif; PAS; SPTR: Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784614; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguan [...] (560 aa)
AEE14826.1Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR000014:IPR000160:IPR001633:IPR013767; KEGG: ddf:DEFDS_1856 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784615; PFAM: EAL domain; GGDEF domain; PAS fold; TIGR [...] (1142 aa)
AEE14827.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: hya:HY04AAS1_0194 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis sensory transducer; IMG reference gene:2504784616; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (458 aa)
AEE14884.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: nis:NIS_0636 hypothetical protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase (GGDEF domain); TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504784675; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (337 aa)
AEE14927.1Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160:IPR001610:IPR013767; KEGG: tjr:TherJR_2660 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate cyclase, predicted; PAS; PAC motif; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784720; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (578 aa)
AEE15057.1Diguanylate cyclase with PAS/PAC and GAF sensors; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160:IPR013767:IPR003018; KEGG: afe:Lferr_2664 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S); TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784854; PFAM: GGDEF domain; MASE1; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (901 aa)
AEE15120.1Diguanylate cyclase/phosphodiesterase with CBS domains; COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633:IPR000644; KEGG: ckr:CKR_1966 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; Cystathionine beta-synthase, core; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; manually curated; IMG reference gene:2504784920; PFAM: EAL domain; CBS domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (588 aa)
AEE15187.1Putative methyl-accepting chemotaxis sensory transducer; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004010:IPR003660; KEGG: toc:Toce_0469 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Cache; HAMP linker domain; SPTR: Methyl-accepting chemotaxis sensory transducer with Cache sensor; IMG reference gene:2504784988; PFAM: HAMP domain; Cache domain. (481 aa)
AEE15188.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: tjr:TherJR_2630 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis sensory transducer with Cache sensor; IMG reference gene:2504784989; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (255 aa)
AEE15224.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: chy:CHY_0134 signal tranducer domain-containing protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SPTR: Signal tranducer domain protein; IMG reference gene:2504785030; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (249 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (675 aa)
AEE15295.1COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090; KEGG: tjr:TherJR_1541 flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; SPTR: Flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; IMG reference gene:2504785101; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG. (335 aa)
AEE15296.1Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (515 aa)
AEE15297.1InterPro IPR001624; KEGG: chy:CHY_0992 flagellar hook-basal body complex protein FliE; PFAM: Flagellar hook-basal body complex protein FliE; SPTR: Flagellar hook-basal body complex protein fliE; IMG reference gene:2504785103; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE. (94 aa)
AEE15298.1COGs: COG1558 Flagellar basal body rod protein; InterPro IPR006299:IPR001444:IPR010930; KEGG: pmo:Pmob_1685 flagellar basal-body rod protein FlgC; PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; SPTR: Flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; IMG reference gene:2504785104; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (134 aa)
fliWFlagellar assembly factor fliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (140 aa)
AEE15300.1COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR013384:IPR001492; KEGG: ttm:Tthe_2194 flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; SPTR: Flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; IMG reference gene:2504785106; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3. (291 aa)
AEE15301.1COGs: COG1256 Flagellar hook-associated protein; InterPro IPR002371:IPR001444:IPR010930; KEGG: tjr:TherJR_2798 flagellar hook-associated protein FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; IMG reference gene:2504785107; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK. (936 aa)
flgIFlagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (367 aa)
AEE15306.1Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (202 aa)
AEE15307.1Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (225 aa)
AEE15308.1COGs: COG4786 Flagellar basal body rod protein; InterPro IPR020013:IPR012834:IPR001444:IPR010930; KEGG: cni:Calni_0447 flagellar basal-body rod protein FlgG; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar basal-body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; manually curated; IMG reference gene:2504785115; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body prote [...] (262 aa)
AEE15309.1COGs: COG4786 Flagellar basal body rod protein; InterPro IPR020013:IPR001444:IPR010930; KEGG: hor:Hore_16580 flagellar basal body rod protein; PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; SPTR: Flagellar basal body rod protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; IMG reference gene:2504785116; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins. (251 aa)
AEE15314.1COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660:IPR003661:IPR003594; KEGG: tte:TTE1017 sensory transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SPTR: Sensory transduction histidine kinases; IMG reference gene:2504785121; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPas [...] (458 aa)
AEE15315.1Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: has:Halsa_1753 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family; IMG reference gene:2504785122; PFAM: Response regulator [...] (230 aa)
AEE15316.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: tjr:TherJR_0843 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis sensory transducer; IMG reference gene:2504785123; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (722 aa)
AEE15366.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: dma:DMR_01390 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis protein; IMG reference gene:2504785176; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (719 aa)
AEE15406.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR018771; KEGG: amt:Amet_3759 methyl-accepting chemotaxis sensory transducer; PFAM: Transcriptional regulator, histidine kinase sensor, N-terminal; Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis sensory transducer; IMG reference gene:2504785217; PFAM: Predicted histidine kinase sensor domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (365 aa)
AEE15414.1COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR012826:IPR007597:IPR001543; KEGG: dhd:Dhaf_4142 CheC, inhibitor of MCP methylation / FliN fusion protein; PFAM: Surface presentation of antigen (SpoA); CheC-like protein; SPTR: CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: Flagellar motor switch FliN; IMG reference gene:2504785225; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN. (386 aa)
AEE15415.1COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689:IPR001543; KEGG: sta:STHERM_c09230 hypothetical protein; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); SPTR: Putative uncharacterized protein; TIGRFAM: Flagellar motor switch protein FliM; IMG reference gene:2504785226; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM. (323 aa)
AEE15416.1MotA/TolQ/ExbB proton channel; COGs: COG1291 Flagellar motor component; InterPro IPR002898; KEGG: sti:Sthe_0579 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel; IMG reference gene:2504785227; PFAM: MotA/TolQ/ExbB proton channel family. (264 aa)
AEE15418.1COGs: COG4786 Flagellar basal body rod protein; InterPro IPR020013:IPR001444:IPR010930; KEGG: bmq:BMQ_4185 flagellar hook protein FlgE; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; IMG reference gene:2504785229; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins. (255 aa)
AEE15419.1COGs: COG1749 Flagellar hook protein FlgE; InterPro IPR020013:IPR001444:IPR011491:IPR010930; KEGG: hor:Hore_16800 flagellar hook protein FlgE; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Flagellar basal body FlaE; SPTR: Flagellar hook protein FlgE, epsilon proteobacterial; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; IMG reference gene:2504785230; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins. (559 aa)
AEE15421.1Flagellar hook capping protein; InterPro IPR005648; KEGG: bja:bll6853 flagellar basal body rod modification protein; PFAM: Flagellar hook capping protein; SPTR: Hook formation protein; IMG reference gene:2504785232; PFAM: Flagellar hook capping protein. (139 aa)
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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