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AEE13954.1 AEE13954.1 AEE15456.1 AEE15456.1 AEE15421.1 AEE15421.1 AEE15399.1 AEE15399.1 cas1-2 cas1-2 cas2-2 cas2-2 AEE15307.1 AEE15307.1 AEE15304.1 AEE15304.1 AEE15301.1 AEE15301.1 fliW fliW flhA flhA AEE15275.1 AEE15275.1 AEE15218.1 AEE15218.1 AEE15156.1 AEE15156.1 AEE15149.1 AEE15149.1 AEE14992.1 AEE14992.1 frr frr AEE14938.1 AEE14938.1 rsfS rsfS AEE14884.1 AEE14884.1 AEE14836.1 AEE14836.1 priA priA AEE14795.1 AEE14795.1 AEE14736.1 AEE14736.1 iscS iscS AEE14725.1 AEE14725.1 AEE14657.1 AEE14657.1 AEE14648.1 AEE14648.1 AEE14647.1 AEE14647.1 AEE14621.1 AEE14621.1 AEE14615.1 AEE14615.1 AEE14609.1 AEE14609.1 AEE14607.1 AEE14607.1 topA topA AEE14562.1 AEE14562.1 AEE14532.1 AEE14532.1 AEE14528.1 AEE14528.1 ruvB ruvB ruvA ruvA AEE14479.1 AEE14479.1 uppP uppP cas2 cas2 cas1 cas1 AEE14449.1 AEE14449.1 prfB prfB rlpA rlpA AEE14322.1 AEE14322.1 minC minC mltG mltG prfA prfA AEE14310.1 AEE14310.1 ftsZ ftsZ ddl ddl murB murB murC murC murG murG murD murD mraY mraY murE murE AEE14263.1 AEE14263.1 murA murA AEE14225.1 AEE14225.1 AEE14208.1 AEE14208.1 AEE14029.1 AEE14029.1 AEE13952.1 AEE13952.1 AEE13942.1 AEE13942.1 AEE13939.1 AEE13939.1 rplT rplT mfd mfd dnaG dnaG AEE13905.1 AEE13905.1 AEE13899.1 AEE13899.1 glmU glmU AEE13887.1 AEE13887.1 AEE13865.1 AEE13865.1 AEE13864.1 AEE13864.1 AEE13863.1 AEE13863.1 AEE13861.1 AEE13861.1 AEE13857.1 AEE13857.1 AEE13827.1 AEE13827.1 AEE13826.1 AEE13826.1 AEE13825.1 AEE13825.1 csrA csrA AEE13820.1 AEE13820.1 AEE13778.1 AEE13778.1 AEE13747.1 AEE13747.1 AEE13743.1 AEE13743.1 AEE13708.1 AEE13708.1 AEE13707.1 AEE13707.1 flhB flhB AEE13675.1 AEE13675.1 AEE13674.1 AEE13674.1 fliP fliP AEE13664.1 AEE13664.1 AEE13659.1 AEE13659.1 AEE13658.1 AEE13658.1
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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AEE13954.1COGs: COG4968 Tfp pilus assembly protein PilE; InterPro IPR012902; KEGG: rxy:Rxyl_1158 Tfp pilus assembly protein PilE; SPTR: Tfp pilus assembly protein PilE; IMG reference gene:2504783678; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain. (132 aa)
AEE15456.1COGs: COG1847 RNA-binding protein; InterPro IPR001374; KEGG: bbe:BBR47_59440 Jag protein; PFAM: Single-stranded nucleic acid binding R3H; SMART: Single-stranded nucleic acid binding R3H; SPTR: Probable Jag protein; IMG reference gene:2504785269; PFAM: R3H domain. (211 aa)
AEE15421.1Flagellar hook capping protein; InterPro IPR005648; KEGG: bja:bll6853 flagellar basal body rod modification protein; PFAM: Flagellar hook capping protein; SPTR: Hook formation protein; IMG reference gene:2504785232; PFAM: Flagellar hook capping protein. (139 aa)
AEE15399.1OstA family protein; InterPro IPR005653; PFAM: OstA-like protein; IMG reference gene:2504785210. (187 aa)
cas1-2CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (344 aa)
cas2-2CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (97 aa)
AEE15307.1Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (225 aa)
AEE15304.1KEGG: aac:Aaci_2567 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2504785110. (118 aa)
AEE15301.1COGs: COG1256 Flagellar hook-associated protein; InterPro IPR002371:IPR001444:IPR010930; KEGG: tjr:TherJR_2798 flagellar hook-associated protein FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; IMG reference gene:2504785107; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK. (936 aa)
fliWFlagellar assembly factor fliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (140 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (675 aa)
AEE15275.1Protein of unknown function DUF1022; COGs: COG3660 nucleoside-diphosphate-sugar epimerase; InterPro IPR009367; KEGG: cha:CHAB381_0656 hypothetical protein; PFAM: Protein of unknown function DUF1022; SPTR: Putative uncharacterized protein; IMG reference gene:2504785081; PFAM: Protein of unknown function (DUF1022). (323 aa)
AEE15218.1ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (397 aa)
AEE15156.1DEAD/DEAH box helicase domain protein; COGs: COG1200 RecG-like helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: dtu:Dtur_1140 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecG; IMG reference gene:2504784957; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG. (667 aa)
AEE15149.1DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545:IPR005580; KEGG: dhd:Dhaf_3118 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein; IMG reference gene:2504784950; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. (531 aa)
AEE14992.1UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: dth:DICTH_0581 ATP-dependent DNA helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: ATP-dependent DNA helicase; IMG reference gene:2504784786; PFAM: UvrD/REP helicase. (610 aa)
frrRibosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. (185 aa)
AEE14938.1Twitching motility protein; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321:IPR001482; KEGG: aae:aq_745 twitching motility protein PilT; PFAM: Type II secretion system protein E; SPTR: Twitching motility protein PilT; TIGRFAM: Pilus retraction protein PilT; IMG reference gene:2504784731; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT. (375 aa)
rsfSIojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. (115 aa)
AEE14884.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: nis:NIS_0636 hypothetical protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase (GGDEF domain); TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504784675; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (337 aa)
AEE14836.1ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (257 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (731 aa)
AEE14795.1Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (277 aa)
AEE14736.1FeS cluster assembly scaffold protein NifU; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR017787:IPR002871; KEGG: ckr:CKR_1215 hypothetical protein; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: NIF system FeS cluster assembly, NifU-like; IMG reference gene:2504784519; PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold IscU; FeS cluster assembly scaffold protein NifU, Clostridium type. (142 aa)
iscSCysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. (402 aa)
AEE14725.1Helicase domain-containing protein; InterPro IPR014001:IPR001650:IPR006935; KEGG: tal:Thal_0495 helicase domain protein; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: Putative uncharacterized protein; IMG reference gene:2504784502; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain. (1119 aa)
AEE14657.1InterPro IPR019734:IPR001440:IPR011716; KEGG: cyp:PCC8801_1300 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-3; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein; IMG reference gene:2504784425; PFAM: Tetratricopeptide repeat. (340 aa)
AEE14648.1UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: tye:THEYE_A1137 UvrD/REP helicase domain protein, putative; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase domain protein, putative; IMG reference gene:2504784416; PFAM: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1040 aa)
AEE14647.1KEGG: tye:THEYE_A1135 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504784415. (949 aa)
AEE14621.1SMC domain protein; COGs: COG1196 Chromosome segregation ATPase; InterPro IPR003395:IPR010935; KEGG: cdf:CD1250 chromosome partition protein; PFAM: RecF/RecN/SMC protein, N-terminal; SMCs flexible hinge; SPTR: Chromosome segregation protein Smc; manually curated; IMG reference gene:2504784389; PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain. (1059 aa)
AEE14615.1COGs: COG1837 RNA-binding protein (contains KH domain); KEGG: RNA-binding protein (KH domain); SPTR: Putative uncharacterized protein; IMG reference gene:2504784383; PFAM: KH domain; Belongs to the UPF0109 family. (81 aa)
AEE14609.1Mg chelatase, subunit ChlI; COGs: COG0606 ATPase with chaperone activity; InterPro IPR004482:IPR003593:IPR000523; KEGG: Mg chelatase subunit ChlI; PFAM: Magnesium chelatase, ChlI subunit; SMART: ATPase, AAA+ type, core; SPTR: Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; IMG reference gene:2504784377; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein. (508 aa)
AEE14607.1Glucose-inhibited division protein A; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391:IPR002372:IPR002218; KEGG: pjd:Pjdr2_5069 putative protein involved in invasion; PFAM: Glucose-inhibited division protein A-related; Pyrrolo-quinoline quinone repeat; SPTR: Putative uncharacterized protein; IMG reference gene:2504784375; PFAM: PQQ enzyme repeat; Thi4 family. (1070 aa)
topADNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (726 aa)
AEE14562.1InterPro IPR001623; KEGG: gsu:GSU2988 hypothetical protein; PFAM: Heat shock protein DnaJ, N-terminal; SPTR: Putative uncharacterized protein; IMG reference gene:2504784328; PFAM: DnaJ domain. (283 aa)
AEE14532.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (441 aa)
AEE14528.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: cni:Calni_1776 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504784292; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (297 aa)
ruvBHolliday junction ATP-dependent DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (319 aa)
ruvAHolliday junction ATP-dependent DNA helicase ruvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (194 aa)
AEE14479.1COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cni:Calni_1175 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2; IMG reference gene:2504784242; PFAM: Glycosyl transferase family 2. (328 aa)
uppPUndecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (253 aa)
cas2CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (88 aa)
cas1CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (338 aa)
AEE14449.1CRISPR-associated protein, Csh2 family; COGs: COG3649 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR006482:IPR013419; KEGG: dtu:Dtur_0623 CRISPR-associated protein, Csh2 family; PFAM: CRISPR-associated protein TM1801; SPTR: CRISPR-associated protein, Csh2 family; TIGRFAM: CRISPR-associated protein Csh2; CRISPR-associated protein TM1801; IMG reference gene:2504784209; PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. (305 aa)
prfBPeptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. (363 aa)
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (274 aa)
AEE14322.1Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: dap:Dacet_1268 rod shape-determining protein RodA; PFAM: Cell cycle protein; SPTR: Rod shape-determining protein RodA; IMG reference gene:2504784068; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; Belongs to the SEDS family. (412 aa)
minCSeptum site-determining protein minC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. (225 aa)
mltGAminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. (329 aa)
prfAPeptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. (361 aa)
AEE14310.1COGs: COG1316 Transcriptional regulator; InterPro IPR004474; KEGG: aco:Amico_0841 cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; SPTR: Cell envelope-related transcriptional attenuator; TIGRFAM: Cell envelope-related transcriptional attenuator; IMG reference gene:2504784056; PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain. (394 aa)
ftsZCell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (361 aa)
ddlD-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (308 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (295 aa)
murCUDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (478 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (360 aa)
murDUDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (464 aa)
mraYPhospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (313 aa)
murEUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (487 aa)
AEE14263.1KEGG: tte:TTE0750 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504784006; PFAM: Protein of unknown function (DUF2837). (267 aa)
murAUDP-N-acetylglucosamine1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (405 aa)
AEE14225.1Glycosyl transferase, family 4, conserved region-containing protein; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: ssp:SSP1969 putative glycosyl transferase; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Putative glycosyl transferase; IMG reference gene:2504783968; PFAM: Glycosyl transferase family 4. (339 aa)
AEE14208.1Fimbrial assembly family protein; InterPro IPR007813; KEGG: sde:Sde_2690 periplasmic sensor signal transduction histidine kinase; PFAM: Fimbrial assembly; SPTR: Fimbrial assembly; IMG reference gene:2504783950; PFAM: Fimbrial assembly protein (PilN). (188 aa)
AEE14029.1KEGG: nis:NIS_1330 plasmid stabilization system protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504783762; PFAM: Plasmid maintenance system killer protein. (91 aa)
AEE13952.1Twitching motility protein; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321:IPR001482:IPR003593; KEGG: dth:DICTH_0722 type IV pilus retraction protein PilT; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core; SPTR: Type IV pilus retraction protein PilT; TIGRFAM: Pilus retraction protein PilT; IMG reference gene:2504783676; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT. (352 aa)
AEE13942.1Glycosyl transferase, WecB/TagA/CpsF family; COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KEGG: chy:CHY_2585 WecB/TagA/CpsF family glycosyl transferase; PFAM: Glycosyl transferase WecB/TagA/CpsF; PRIAM: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; SPTR: Glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; IMG reference gene:2504783664; PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; Belongs to the glycosyltransfe [...] (239 aa)
AEE13939.1SufBD protein; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: tye:THEYE_A0165 SufB/SufD domain protein; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: SufB/sufD domain protein; IMG reference gene:2504783661; PFAM: Uncharacterized protein family (UPF0051). (416 aa)
rplT50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (115 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1111 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (560 aa)
AEE13905.1Glycosidase related protein; COGs: COG2152 glycosylase; InterPro IPR007184; KEGG: tte:TTE2626 glycosylase; PFAM: Glycosidase, PH1107-related; SPTR: Predicted glycosylase; IMG reference gene:2504783626; PFAM: Domain of unknown function (DUF377). (317 aa)
AEE13899.1Glycosidase related protein; COGs: COG2152 glycosylase; InterPro IPR007184; KEGG: dps:DP2454 hypothetical protein; PFAM: Glycosidase, PH1107-related; SPTR: Putative uncharacterized protein; IMG reference gene:2504783620; PFAM: Domain of unknown function (DUF377). (316 aa)
glmUBifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (461 aa)
AEE13887.1GTP-binding protein TypA; COGs: COG1217 membrane GTPase involved in stress response; InterProIPR005225:IPR006298:IPR000795:IPR004161:IPR 000640; KEGG: vpr:Vpar_1324 GTP-binding protein TypA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; IMG reference gene:2504783607; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-bindin [...] (597 aa)
AEE13865.1KEGG: cwo:Cwoe_0009 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504783583. (134 aa)
AEE13864.1COGs: COG2359 conserved hypothetical protein; InterPro IPR007347; KEGG: swo:Swol_1250 stage V sporulation protein S; PFAM: Stage V sporulation protein S; SPTR: Stage V sporulation protein S; IMG reference gene:2504783582; PFAM: Stage V sporulation protein S (SpoVS). (87 aa)
AEE13863.1COGs: COG0728 membrane protein putative virulence factor; InterPro IPR004268; KEGG: cst:CLOST_0370 integral membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN; SPTR: Integral membrane protein MviN; IMG reference gene:2504783580; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN. (511 aa)
AEE13861.1COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: tal:Thal_0259 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; IMG reference gene:2504783578; PFAM: Aminotransferase class-V. (375 aa)
AEE13857.1COGs: COG2359 conserved hypothetical protein; InterPro IPR007347; KEGG: toc:Toce_1207 stage V sporulation protein S; PFAM: Stage V sporulation protein S; SPTR: Stage V sporulation protein S; IMG reference gene:2504783574; PFAM: Stage V sporulation protein S (SpoVS). (90 aa)
AEE13827.1Cobyrinic acid ac-diamide synthase; COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: slp:Slip_0975 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; IMG reference gene:2504783544; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. (328 aa)
AEE13826.1GTP-binding signal recognition particle SRP54 G- domain protein; COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR000897:IPR003593; KEGG: ddf:DEFDS_0415 flagellar biosynthesis protein FlhF; PFAM: Signal recognition particle, SRP54 subunit, GTPase; SMART: ATPase, AAA+ type, core; SPTR: Flagellar biosynthesis protein FlhF; IMG reference gene:2504783543; PFAM: SRP54-type protein, GTPase domain. (352 aa)
AEE13825.1ATPase, FliI/YscN family; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR005714:IPR004100:IPR000194:IPR003593; KEGG: cth:Cthe_0468 flagellar protein export ATPase FliI; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; PRIAM: H(+)-transporting two-sector ATPase; SMART: ATPase, AAA+ type, core; SPTR: Type III secretion system ATPase, FliI/YscN; TIGRFAM: ATPase, type III secretion system, FliI/YscN; IMG reference gene:2504783542; PFAM: ATP synthase alpha/beta family [...] (435 aa)
csrACarbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (79 aa)
AEE13820.1Flagellar protein FliS; COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: dal:Dalk_0645 flagellar protein FliS; PFAM: Flagellar protein FliS; SPTR: Flagellar protein FliS; TIGRFAM: Flagellar protein FliS; IMG reference gene:2504783537; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS. (128 aa)
AEE13778.1COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: dhd:Dhaf_0135 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504783493; PFAM: Bacterial DNA-binding protein. (106 aa)
AEE13747.1Nitrate reductase molybdenum cofactor assembly chaperone; COGs: COG2180 Nitrate reductase delta subunit; InterPro IPR003765; KEGG: har:HEAR1660 respiratory nitrate reductase subunit delta; PFAM: Nitrate reductase, delta subunit; SPTR: Nitrate reductase molybdenum cofactor assembly chaperone; TIGRFAM: Nitrate reductase, delta subunit; IMG reference gene:2504783459; PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone. (169 aa)
AEE13743.1InterPro IPR007301:IPR011636; KEGG: bfs:BF2693 hypothetical protein; PFAM: TQO small subunit DoxD; TQO small subunit DoxA; SPTR: Quinol oxidase subunit; IMG reference gene:2504783455; PFAM: TQO small subunit DoxA; TQO small subunit DoxD. (338 aa)
AEE13708.1Outer membrane chaperone Skp (OmpH); InterPro IPR005632; KEGG: dth:DICTH_0659 cationic outer membrane protein, putative; PFAM: Outer membrane chaperone Skp (OmpH); SPTR: Cationic outer membrane protein, putative; IMG reference gene:2504783419; PFAM: Outer membrane protein (OmpH-like); Borrelia burgdorferi REV protein. (158 aa)
AEE13707.1Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: aar:Acear_2201 surface antigen (D15); PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Surface antigen (D15); IMG reference gene:2504783418; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein. (573 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (349 aa)
AEE13675.1Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (256 aa)
AEE13674.1Export protein FliQ family 3; COGs: COG1987 Flagellar biosynthesis pathway component FliQ; InterPro IPR002191; KEGG: cvi:CV_3125 flagellar biosynthetic protein FliQ; PFAM: Bacterial export protein FliQ, family 3; SPTR: Flagellar biosynthetic protein FliQ; IMG reference gene:2504783384; PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ. (89 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (248 aa)
AEE13664.1MgtE intracellular region; InterPro IPR006668; KEGG: tmt:Tmath_1281 MgtE intracellular region; PFAM: Magnesium transporter, MgtE intracellular region; SPTR: Putative uncharacterized protein; IMG reference gene:2504783374; PFAM: MgtE intracellular N domain. (168 aa)
AEE13659.1COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR005743:IPR002205:IPR006691; KEGG: DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; SPTR: DNA gyrase, A subunit; TIGRFAM: DNA gyrase, subunit A; IMG reference gene:2504783369; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A [...] (804 aa)
AEE13658.1COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR003594:IPR013506:IPR006171:IPR002288:IPR 001241; KEGG: tit:Thit_0010 DNA gyrase, B subunit; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; SPTR: DNA gyrase, B subunit; IMG reference gene:2504783368; PFAM: Toprim domain; Histidine kinase-, DNA gyras [...] (632 aa)
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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