STRINGSTRING
AEE14931.1 AEE14931.1 metE metE AEE14997.1 AEE14997.1 AEE15027.1 AEE15027.1 menG menG AEE15073.1 AEE15073.1 AEE15079.1 AEE15079.1 AEE15087.1 AEE15087.1 AEE15143.1 AEE15143.1 AEE15157.1 AEE15157.1 AEE15204.1 AEE15204.1 AEE15292.1 AEE15292.1 AEE15411.1 AEE15411.1 AEE15434.1 AEE15434.1 rsmG rsmG AEE13671.1 AEE13671.1 AEE13698.1 AEE13698.1 AEE13763.1 AEE13763.1 AEE13796.1 AEE13796.1 AEE13868.1 AEE13868.1 AEE13933.1 AEE13933.1 AEE14127.1 AEE14127.1 rsmH rsmH AEE14371.1 AEE14371.1 AEE14496.1 AEE14496.1 trmFO trmFO trmD trmD rlmN rlmN AEE14632.1 AEE14632.1 AEE14636.1 AEE14636.1 AEE14703.1 AEE14703.1 AEE14812.1 AEE14812.1 rsmA rsmA AEE14842.1 AEE14842.1 AEE14853.1 AEE14853.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
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AEE14931.1Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. (240 aa)
metE5-methyltetrahydropteroyltriglutamate-- homocysteinemethyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (754 aa)
AEE14997.1Methyltransferase type 12; InterPro IPR013217; KEGG: cki:Calkr_2324 methyltransferase type 11; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 11; IMG reference gene:2504784793; PFAM: Methyltransferase domain. (198 aa)
AEE15027.1Uncharacterized protein family UPF0066; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: tye:THEYE_A1086 hypothetical protein; PFAM: Uncharacterised protein family UPF0066; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0066; IMG reference gene:2504784823; PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family. (136 aa)
menGUbiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (229 aa)
AEE15073.1KEGG: pmo:Pmob_1534 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504784871; PFAM: Eco57I restriction endonuclease. (1108 aa)
AEE15079.1COGs: COG0338 Site-specific DNA methylase; InterPro IPR012326:IPR012327; KEGG: bcy:Bcer98_3991 DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: Modification methylase lladchia; TIGRFAM: DNA adenine methylase; IMG reference gene:2504784878; PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam). (283 aa)
AEE15087.1uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366:IPR000878:IPR003754; KEGG: slp:Slip_1426 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; PRIAM: Uroporphyrinogen-III C-methyltransferase., Uroporphyrinogen-III synthase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; IMG reference gene:2504784886; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin [...] (500 aa)
AEE15143.1Methyltransferase type 11; InterPro IPR013216; KEGG: dol:Dole_1540 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; IMG reference gene:2504784944; PFAM: Methyltransferase domain. (394 aa)
AEE15157.1Protein of unknown function methylase putative; COGs: COG0742 N6-adenine-specific methylase; InterPro IPR016065; KEGG: adg:Adeg_0116 methyltransferase; PFAM: Protein of unknown function methylase putative; SPTR: Methyltransferase; IMG reference gene:2504784958; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family. (187 aa)
AEE15204.1Protein of unknown function UPF0153; InterPro IPR005358; KEGG: tye:THEYE_A0135 lipoprotein, putative; PFAM: Uncharacterised protein family UPF0153; SPTR: Lipoprotein, putative; IMG reference gene:2504785010; PFAM: Uncharacterised protein family (UPF0153). (253 aa)
AEE15292.1(Uracil-5)-methyltransferase; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR010280; KEGG: taf:THA_1877 23S rRNA (uracil-5-)-methyltransferase RumA; PFAM: (Uracil-5)-methyltransferase; SPTR: 23S rRNA (Uracil-5-)-methyltransferase RumA; IMG reference gene:2504785098; PFAM: tRNA (Uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (413 aa)
AEE15411.1Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: cst:CLOST_0716 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; IMG reference gene:2504785222; PFAM: Methyltransferase domain. (188 aa)
AEE15434.1Methyltransferase type 12; InterPro IPR013217; KEGG: ddf:DEFDS_1303 biotin biosynthesis protein BioC; PFAM: Methyltransferase type 12; SPTR: Biotin biosynthesis protein BioC; IMG reference gene:2504785245; PFAM: Methyltransferase domain. (255 aa)
rsmGRibosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. (207 aa)
AEE13671.1MCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: cbb:CLD_1825 chemotaxis protein methyltransferase CheR; PFAM: MCP methyltransferase, CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase, CheR-type; SPTR: Chemotaxis protein methyltransferase, CheR; IMG reference gene:2504783381; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain. (260 aa)
AEE13698.1methylated-DNA/protein- cysteinemethyltransferase; COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: cdf:CD1770 methylated-DNA--protein-cysteine methyltransferase 2; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Methylated-DNA--[protein]-cysteine S-methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; IMG reference gene:2504783409; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase. (161 aa)
AEE13763.1Uncharacterized protein family UPF0066; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: rci:RCIX1646 hypothetical protein; PFAM: Uncharacterised protein family UPF0066; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0066; IMG reference gene:2504783475; PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family. (235 aa)
AEE13796.1tRNA/rRNA methyltransferase (SpoU); Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. (149 aa)
AEE13868.1Protein of unknown function UPF0011; COGs: COG0313 methyltransferase; InterPro IPR008189:IPR000878; KEGG: uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Tetrapyrrole methylase; TIGRFAM: Uncharacterised protein family UPF0011; IMG reference gene:2504783586; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family. (268 aa)
AEE13933.1tRNA/rRNA methyltransferase (SpoU); COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537; KEGG: cbk:CLL_A2474 RNA methyltransferase, TrmH family; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SPTR: tRNA/rRNA methyltransferase; IMG reference gene:2504783655; PFAM: SpoU rRNA Methylase family. (253 aa)
AEE14127.1InterPro IPR010787; KEGG: protein of unknown function DUF1385; PFAM: Protein of unknown function DUF1385; SPTR: Putative uncharacterized protein; IMG reference gene:2504783866; PFAM: Protein of unknown function (DUF1385). (375 aa)
rsmHRibosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (298 aa)
AEE14371.1RNA methyltransferase, TrmH family, group 3; COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537:IPR004441; KEGG: bha:BH0113 tRNA/rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SPTR: tRNA/rRNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 3; IMG reference gene:2504784123; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (244 aa)
AEE14496.1Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tko:TK0704 SAM-dependent methyltransferase; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase, UbiE/COQ5 family; IMG reference gene:2504784259; PFAM: Methyltransferase domain. (301 aa)
trmFOMethylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. (446 aa)
trmDtRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (253 aa)
rlmNRibosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (353 aa)
AEE14632.1Fmu (Sun) domain protein; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: tit:Thit_1309 sun protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: Sun protein; IMG reference gene:2504784400; PFAM: NOL1/NOP2/sun family; NusB family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (420 aa)
AEE14636.1Methyltransferase type 11; InterPro IPR013216; KEGG: dal:Dalk_3488 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; IMG reference gene:2504784404; PFAM: Methyltransferase domain. (401 aa)
AEE14703.1Prepilin peptidase; COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627:IPR000045; KEGG: chy:CHY_0634 type IV prepilin peptidase; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV; PRIAM: Prepilin peptidase; SPTR: Type IV prepilin peptidase; IMG reference gene:2504784480; PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family. (245 aa)
AEE14812.1KEGG: dal:Dalk_0286 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504784601; PFAM: Uncharacterised protein family (UPF0153). (192 aa)
rsmARibosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (263 aa)
AEE14842.1tRNA methyltransferase complex GCD14 subunit; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. (255 aa)
AEE14853.1protein-(glutamine-N5) methyltransferase, release factor-specific; COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR004556:IPR019874:IPR013216; KEGG: cow:Calow_0888 protein-(glutamine-n5) methyltransferase, release factor-specific; PFAM: Methyltransferase type 11; SPTR: Protein-(Glutamine-N5) methyltransferase, release factor-specific; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; IMG reference gene:2504784643; PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glut [...] (290 aa)
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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