STRINGSTRING
fliP fliP AEE13674.1 AEE13674.1 AEE13675.1 AEE13675.1 flhB flhB AEE13820.1 AEE13820.1 csrA csrA AEE13825.1 AEE13825.1 AEE13826.1 AEE13826.1 AEE13827.1 AEE13827.1 flhA flhA fliW fliW AEE15301.1 AEE15301.1 AEE15304.1 AEE15304.1 AEE15307.1 AEE15307.1 AEE15421.1 AEE15421.1 AEE13664.1 AEE13664.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (248 aa)
AEE13674.1Export protein FliQ family 3; COGs: COG1987 Flagellar biosynthesis pathway component FliQ; InterPro IPR002191; KEGG: cvi:CV_3125 flagellar biosynthetic protein FliQ; PFAM: Bacterial export protein FliQ, family 3; SPTR: Flagellar biosynthetic protein FliQ; IMG reference gene:2504783384; PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ. (89 aa)
AEE13675.1Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (256 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (349 aa)
AEE13820.1Flagellar protein FliS; COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: dal:Dalk_0645 flagellar protein FliS; PFAM: Flagellar protein FliS; SPTR: Flagellar protein FliS; TIGRFAM: Flagellar protein FliS; IMG reference gene:2504783537; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS. (128 aa)
csrACarbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (79 aa)
AEE13825.1ATPase, FliI/YscN family; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR005714:IPR004100:IPR000194:IPR003593; KEGG: cth:Cthe_0468 flagellar protein export ATPase FliI; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; PRIAM: H(+)-transporting two-sector ATPase; SMART: ATPase, AAA+ type, core; SPTR: Type III secretion system ATPase, FliI/YscN; TIGRFAM: ATPase, type III secretion system, FliI/YscN; IMG reference gene:2504783542; PFAM: ATP synthase alpha/beta family [...] (435 aa)
AEE13826.1GTP-binding signal recognition particle SRP54 G- domain protein; COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR000897:IPR003593; KEGG: ddf:DEFDS_0415 flagellar biosynthesis protein FlhF; PFAM: Signal recognition particle, SRP54 subunit, GTPase; SMART: ATPase, AAA+ type, core; SPTR: Flagellar biosynthesis protein FlhF; IMG reference gene:2504783543; PFAM: SRP54-type protein, GTPase domain. (352 aa)
AEE13827.1Cobyrinic acid ac-diamide synthase; COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: slp:Slip_0975 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; IMG reference gene:2504783544; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. (328 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (675 aa)
fliWFlagellar assembly factor fliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (140 aa)
AEE15301.1COGs: COG1256 Flagellar hook-associated protein; InterPro IPR002371:IPR001444:IPR010930; KEGG: tjr:TherJR_2798 flagellar hook-associated protein FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; IMG reference gene:2504785107; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK. (936 aa)
AEE15304.1KEGG: aac:Aaci_2567 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2504785110. (118 aa)
AEE15307.1Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (225 aa)
AEE15421.1Flagellar hook capping protein; InterPro IPR005648; KEGG: bja:bll6853 flagellar basal body rod modification protein; PFAM: Flagellar hook capping protein; SPTR: Hook formation protein; IMG reference gene:2504785232; PFAM: Flagellar hook capping protein. (139 aa)
AEE13664.1MgtE intracellular region; InterPro IPR006668; KEGG: tmt:Tmath_1281 MgtE intracellular region; PFAM: Magnesium transporter, MgtE intracellular region; SPTR: Putative uncharacterized protein; IMG reference gene:2504783374; PFAM: MgtE intracellular N domain. (168 aa)
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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