STRINGSTRING
AEE14796.1 AEE14796.1 AEE14804.1 AEE14804.1 AEE14825.1 AEE14825.1 AEE14826.1 AEE14826.1 AEE14827.1 AEE14827.1 AEE14832.1 AEE14832.1 AEE14854.1 AEE14854.1 AEE14857.1 AEE14857.1 AEE14860.1 AEE14860.1 codY codY AEE14884.1 AEE14884.1 AEE14898.1 AEE14898.1 AEE14919.1 AEE14919.1 AEE14927.1 AEE14927.1 hrcA hrcA rsfS rsfS AEE14957.1 AEE14957.1 tsf tsf AEE14990.1 AEE14990.1 AEE15007.1 AEE15007.1 AEE15032.1 AEE15032.1 AEE15057.1 AEE15057.1 AEE15077.1 AEE15077.1 AEE15078.1 AEE15078.1 AEE15084.1 AEE15084.1 AEE15094.1 AEE15094.1 AEE15161.1 AEE15161.1 AEE15175.1 AEE15175.1 AEE15176.1 AEE15176.1 AEE15183.1 AEE15183.1 AEE15187.1 AEE15187.1 AEE15188.1 AEE15188.1 AEE15197.1 AEE15197.1 AEE15203.1 AEE15203.1 AEE15224.1 AEE15224.1 AEE15229.1 AEE15229.1 glnD glnD AEE15234.1 AEE15234.1 AEE15235.1 AEE15235.1 AEE15236.1 AEE15236.1 AEE15263.1 AEE15263.1 AEE15282.1 AEE15282.1 AEE15283.1 AEE15283.1 AEE15291.1 AEE15291.1 fliW fliW AEE15310.1 AEE15310.1 AEE15314.1 AEE15314.1 AEE15315.1 AEE15315.1 AEE15316.1 AEE15316.1 AEE15323.1 AEE15323.1 AEE15344.1 AEE15344.1 AEE15345.1 AEE15345.1 AEE15348.1 AEE15348.1 AEE15366.1 AEE15366.1 AEE15382.1 AEE15382.1 AEE15406.1 AEE15406.1 AEE15440.1 AEE15440.1 AEE15456.1 AEE15456.1 AEE14029.1 AEE14029.1 AEE14050.1 AEE14050.1 AEE14054.1 AEE14054.1 AEE14061.1 AEE14061.1 AEE14075.1 AEE14075.1 AEE14080.1 AEE14080.1 AEE14090.1 AEE14090.1 AEE14103.1 AEE14103.1 AEE14108.1 AEE14108.1 fusA fusA tuf tuf infA infA AEE14185.1 AEE14185.1 nusG nusG rplA rplA AEE14199.1 AEE14199.1 pnp pnp murA murA nusA nusA infB infB AEE14263.1 AEE14263.1 mraZ mraZ murE murE mraY mraY murD murD AEE14299.1 AEE14299.1 murG murG murC murC murB murB ddl ddl prfA prfA AEE14315.1 AEE14315.1 AEE14316.1 AEE14316.1 minC minC AEE14320.1 AEE14320.1 minE minE AEE14322.1 AEE14322.1 sigA sigA AEE14382.1 AEE14382.1 AEE14383.1 AEE14383.1 mutS2 mutS2 greA greA AEE14397.1 AEE14397.1 hpf hpf prfB prfB AEE14416.1 AEE14416.1 AEE14430.1 AEE14430.1 AEE13978.1 AEE13978.1 AEE14443.1 AEE14443.1 AEE14444.1 AEE14444.1 AEE14461.1 AEE14461.1 AEE14464.1 AEE14464.1 uppP uppP AEE14479.1 AEE14479.1 AEE14488.1 AEE14488.1 AEE14489.1 AEE14489.1 AEE14503.1 AEE14503.1 AEE14507.1 AEE14507.1 AEE14516.1 AEE14516.1 AEE14528.1 AEE14528.1 AEE14554.1 AEE14554.1 AEE14559.1 AEE14559.1 AEE14570.1 AEE14570.1 AEE14573.1 AEE14573.1 AEE14583.1 AEE14583.1 AEE14592.1 AEE14592.1 AEE14615.1 AEE14615.1 AEE14627.1 AEE14627.1 AEE14632.1 AEE14632.1 AEE14655.1 AEE14655.1 AEE14672.1 AEE14672.1 AEE14694.1 AEE14694.1 AEE14708.1 AEE14708.1 AEE14726.1 AEE14726.1 selA selA AEE14745.1 AEE14745.1 AEE14747.1 AEE14747.1 AEE14749.1 AEE14749.1 AEE14767.1 AEE14767.1 AEE14781.1 AEE14781.1 AEE14794.1 AEE14794.1 AEE14795.1 AEE14795.1 dnaA dnaA AEE13661.1 AEE13661.1 AEE13662.1 AEE13662.1 AEE13667.1 AEE13667.1 cheB cheB AEE13679.1 AEE13679.1 AEE13680.1 AEE13680.1 AEE13681.1 AEE13681.1 AEE13684.1 AEE13684.1 AEE13697.1 AEE13697.1 efp efp nusB nusB AEE13797.1 AEE13797.1 rny rny csrA csrA AEE13827.1 AEE13827.1 AEE13833.1 AEE13833.1 AEE13834.1 AEE13834.1 lepA lepA AEE13858.1 AEE13858.1 AEE13862.1 AEE13862.1 AEE13863.1 AEE13863.1 AEE13871.1 AEE13871.1 AEE13882.1 AEE13882.1 glmU glmU AEE13893.1 AEE13893.1 AEE13904.1 AEE13904.1 AEE13908.1 AEE13908.1 mfd mfd infC infC AEE13967.1 AEE13967.1 AEE13976.1 AEE13976.1
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query proteins and first shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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AEE14796.1(Glutamate--ammonia-ligase) adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal tra [...] (957 aa)
AEE14804.1RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: bpu:BPUM_0160 RNA polymerase sigma factor SigW; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: ECF family DNA-directed RNA polymerase sigma subunit SigW; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504784593; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family. (184 aa)
AEE14825.1Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterProIPR000014:IPR000160:IPR001610:IPR013656:IPR 013767; KEGG: chy:CHY_0880 response regulator/sensory box protein/GGDEF domain-containing protein; PFAM: Diguanylate cyclase, predicted; PAS fold; PAS fold-4; PRIAM: Diguanylate kinase; SMART: Diguanylate cyclase, predicted; PAC motif; PAS; SPTR: Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784614; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguan [...] (560 aa)
AEE14826.1Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR000014:IPR000160:IPR001633:IPR013767; KEGG: ddf:DEFDS_1856 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784615; PFAM: EAL domain; GGDEF domain; PAS fold; TIGR [...] (1142 aa)
AEE14827.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: hya:HY04AAS1_0194 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis sensory transducer; IMG reference gene:2504784616; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (458 aa)
AEE14832.1Putative transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; KEGG: tjr:TherJR_1140 putative transcriptional regulator, AsnC family; SPTR: Putative transcriptional regulator, AsnC family; IMG reference gene:2504784621. (158 aa)
AEE14854.1Transcriptional regulator, GntR family; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: bmq:BMQ_2866 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; IMG reference gene:2504784644; PFAM: Bacterial regulatory proteins, gntR family; FCD domain. (222 aa)
AEE14857.12'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. (181 aa)
AEE14860.1Transcriptional regulator, XRE family; COGs: COG1426 conserved hypothetical protein; InterPro IPR001387; KEGG: tye:THEYE_A1071 hypothetical protein; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; IMG reference gene:2504784650. (241 aa)
codYGTP-sensing pleiotropic transcriptional repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. (276 aa)
AEE14884.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: nis:NIS_0636 hypothetical protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase (GGDEF domain); TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504784675; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (337 aa)
AEE14898.1Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: ferric-uptake regulator; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; IMG reference gene:2504784690; PFAM: Ferric uptake regulator family; Belongs to the Fur family. (126 aa)
AEE14919.1Proteinase inhibitor I4 serpin; COGs: COG4826 Serine protease inhibitor; InterPro IPR000215; KEGG: npu:Npun_R1539 proteinase inhibitor I4, serpin; PFAM: Protease inhibitor I4, serpin; SMART: Protease inhibitor I4, serpin; SPTR: Proteinase inhibitor I4, serpin; IMG reference gene:2504784712; PFAM: Serpin (serine protease inhibitor); Belongs to the serpin family. (402 aa)
AEE14927.1Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160:IPR001610:IPR013767; KEGG: tjr:TherJR_2660 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate cyclase, predicted; PAS; PAC motif; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784720; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (578 aa)
hrcAHeat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (349 aa)
rsfSIojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. (115 aa)
AEE14957.1Tryptophan RNA-binding attenuator protein; InterPro IPR000824; KEGG: cth:Cthe_1263 transcription attenuation protein MtrB; PFAM: Tryptophan RNA-binding attenuator protein; SPTR: Tryptophan RNA-binding attenuator protein; IMG reference gene:2504784750; PFAM: Tryptophan RNA-binding attenuator protein. (100 aa)
tsfElongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (199 aa)
AEE14990.1Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR005746:IPR013766; KEGG: thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; IMG reference gene:2504784784; PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family. (103 aa)
AEE15007.1Regulatory protein ArsR; InterPro IPR001845; KEGG: aba:Acid345_0027 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family; IMG reference gene:2504784803; PFAM: Bacterial regulatory protein, arsR family. (92 aa)
AEE15032.1COGs: COG1522 Transcriptional regulators; InterPro IPR019888; KEGG: drm:Dred_2157 AsnC family transcriptional regulator; SMART: Transcription regulator, AsnC-type; SPTR: Putative transcriptional regulator, AsnC family; IMG reference gene:2504784828. (167 aa)
AEE15057.1Diguanylate cyclase with PAS/PAC and GAF sensors; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160:IPR013767:IPR003018; KEGG: afe:Lferr_2664 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: Diguanylate cyclase, predicted; PAS fold; GAF; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S); TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784854; PFAM: GGDEF domain; MASE1; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (901 aa)
AEE15077.1Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: cni:Calni_0142 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family; IMG reference gene:2504784876; PFAM: Response regulator [...] (225 aa)
AEE15078.1COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR003660; KEGG: cni:Calni_0141 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase; IMG reference gene:2504784877; PFAM: HAMP domain; Histidine kinase-, DNA g [...] (441 aa)
AEE15084.1Protein of unknown function UPF0005; COGs: COG0670 Integral membrane protein interacts with FtsH; InterPro IPR006214; KEGG: dat:HRM2_25640 putative cold-shock inducible membrane protein; PFAM: Uncharacterised protein family UPF0005; SPTR: Putative uncharacterized protein; IMG reference gene:2504784883; PFAM: Uncharacterised protein family UPF0005; Belongs to the BI1 family. (232 aa)
AEE15094.1Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake. (219 aa)
AEE15161.1Transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: aco:Amico_0308 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: Transcriptional regulator, LuxR family; IMG reference gene:2504784962; PFAM: Bacterial regulatory proteins, luxR family. (459 aa)
AEE15175.1COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003660:IPR011712:IPR003594; KEGG: nth:Nther_0649 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; HAMP linker domain; ATP-binding region, ATPase-like; SPTR: Integral membrane sensor signal transduction histidine kinase; IMG reference gene:2504784976; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (465 aa)
AEE15176.1Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: dhd:Dhaf_1230 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family; IMG reference gene:2504784977; PFAM: Response regulator rece [...] (232 aa)
AEE15183.1KEGG: pph:Ppha_1368 peptidase S24 and S26 domain protein; SPTR: SOS-response transcriptional repressors (RecA-mediated autopeptidase)-like; IMG reference gene:2504784984. (98 aa)
AEE15187.1Putative methyl-accepting chemotaxis sensory transducer; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004010:IPR003660; KEGG: toc:Toce_0469 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Cache; HAMP linker domain; SPTR: Methyl-accepting chemotaxis sensory transducer with Cache sensor; IMG reference gene:2504784988; PFAM: HAMP domain; Cache domain. (481 aa)
AEE15188.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: tjr:TherJR_2630 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis sensory transducer with Cache sensor; IMG reference gene:2504784989; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (255 aa)
AEE15197.1Transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: sat:SYN_00248 cyclic nucleotide-binding domain-containing protein; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SPTR: Putative uncharacterized protein; IMG reference gene:2504785002; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain. (221 aa)
AEE15203.1Transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: adg:Adeg_1955 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; SPTR: Transcriptional regulator, Crp/Fnr family; IMG reference gene:2504785009; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain. (247 aa)
AEE15224.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: chy:CHY_0134 signal tranducer domain-containing protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SPTR: Signal tranducer domain protein; IMG reference gene:2504785030; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (249 aa)
AEE15229.1Glutaredoxin; InterPro IPR002109; KEGG: dal:Dalk_2923 glutaredoxin; PFAM: Glutaredoxin; SPTR: Glutaredoxin; IMG reference gene:2504785035; PFAM: Glutaredoxin. (86 aa)
glnDUTP-GlnB uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism. (849 aa)
AEE15234.1UPF0042 nucleotide-binding protein yhbJ; Displays ATPase and GTPase activities. (292 aa)
AEE15235.1Uncharacterized protein family UPF0052; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. (434 aa)
AEE15236.1Sporulation regulator WhiA; Involved in cell division and chromosome segregation. (287 aa)
AEE15263.1Sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR000014:IPR013656:IPR002078:IPR002197; KEGG: pca:Pcar_1580 transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold-4; Helix-turn-helix, Fis-type; SMART: PAS; SPTR: Transcriptional regulator; TIGRFAM: PAS; IMG reference gene:2504785069; PFAM: Bacterial regulatory protein, Fis family; PAS fold; TIGRFAM: PAS domain S-box. (417 aa)
AEE15282.1COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003660:IPR003594; KEGG: ATPase ATP-binding domain-containing protein; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; SMART: HAMP linker domain; ATP-binding region, ATPase-like; SPTR: Histidine kinase; IMG reference gene:2504785088; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (468 aa)
AEE15283.1Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: dhd:Dhaf_1230 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SPTR: Putative uncharacterized protein; IMG reference gene:2504785089; PFAM: Response regulator receiver domain; Bacteri [...] (231 aa)
AEE15291.1COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: dal:Dalk_5099 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; IMG reference gene:2504785097; PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (114 aa)
fliWFlagellar assembly factor fliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (140 aa)
AEE15310.1PAS sensor protein; InterPro IPR000014:IPR013655:IPR013767; KEGG: ppn:Palpr_2639 pas/pac sensor hybrid histidine kinase; PFAM: PAS fold-3; PAS fold; SMART: PAS; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; IMG reference gene:2504785117; PFAM: PAS fold; TIGRFAM: PAS domain S-box. (660 aa)
AEE15314.1COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660:IPR003661:IPR003594; KEGG: tte:TTE1017 sensory transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SPTR: Sensory transduction histidine kinases; IMG reference gene:2504785121; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPas [...] (458 aa)
AEE15315.1Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: has:Halsa_1753 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family; IMG reference gene:2504785122; PFAM: Response regulator [...] (230 aa)
AEE15316.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: tjr:TherJR_0843 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis sensory transducer; IMG reference gene:2504785123; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (722 aa)
AEE15323.1Regulatory protein ArsR; InterPro IPR001845; KEGG: tmt:Tmath_0944 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family; IMG reference gene:2504785130; PFAM: Bacterial regulatory protein, arsR family. (109 aa)
AEE15344.1KEGG: bbe:BBR47_39300 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504785153. (427 aa)
AEE15345.1KEGG: gym:GYMC10_5299 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504785154. (266 aa)
AEE15348.1Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367:IPR007167; KEGG: adg:Adeg_0633 iron (metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor; SPTR: Iron (Metal) dependent repressor, DtxR family; IMG reference gene:2504785158; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain. (239 aa)
AEE15366.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: dma:DMR_01390 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis protein; IMG reference gene:2504785176; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (719 aa)
AEE15382.1KEGG: slp:Slip_1400 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504785192. (96 aa)
AEE15406.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR018771; KEGG: amt:Amet_3759 methyl-accepting chemotaxis sensory transducer; PFAM: Transcriptional regulator, histidine kinase sensor, N-terminal; Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis sensory transducer; IMG reference gene:2504785217; PFAM: Predicted histidine kinase sensor domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (365 aa)
AEE15440.1parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR004437:IPR003115; KEGG: mcl:MCCL_1950 chromosome partitioning protein ParB homolog; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: Chromosome partitioning protein ParB homolog; TIGRFAM: ParB-like partition protein; IMG reference gene:2504785251; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family. (299 aa)
AEE15456.1COGs: COG1847 RNA-binding protein; InterPro IPR001374; KEGG: bbe:BBR47_59440 Jag protein; PFAM: Single-stranded nucleic acid binding R3H; SMART: Single-stranded nucleic acid binding R3H; SPTR: Probable Jag protein; IMG reference gene:2504785269; PFAM: R3H domain. (211 aa)
AEE14029.1KEGG: nis:NIS_1330 plasmid stabilization system protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504783762; PFAM: Plasmid maintenance system killer protein. (91 aa)
AEE14050.1Uncharacterized protein family UPF0150; InterPro IPR005357; KEGG: mem:Memar_1245 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Toxin-antitoxin system, antitoxin component, HicB family; IMG reference gene:2504783784; PFAM: Uncharacterised protein family (UPF0150). (50 aa)
AEE14054.1Uncharacterized protein family UPF0150; COGs: COG1598 conserved hypothetical protein; InterPro IPR005357; KEGG: cyh:Cyan8802_2602 protein of unknown function UPF0150; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein; IMG reference gene:2504783789; PFAM: Uncharacterised protein family (UPF0150). (76 aa)
AEE14061.1Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR000014:IPR000160:IPR001633:IPR013767:IPR 003018:IPR013655; KEGG: nis:NIS_0136 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; GAF; PAS fold; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504783796; PFA [...] (847 aa)
AEE14075.1Protein of unknown function DUF156; COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: kol:Kole_1085 protein of unknown function DUF156; PFAM: Protein of unknown function DUF156; SPTR: Putative uncharacterized protein; IMG reference gene:2504783811; PFAM: Uncharacterised BCR, COG1937. (97 aa)
AEE14080.1COGs: COG4443 conserved hypothetical protein; InterPro IPR017154; KEGG: cby:CLM_2293 hypothetical protein; PFAM: Uncharacterised conserved protein UCP037246; SPTR: Conserved domain protein; IMG reference gene:2504783817; PFAM: Uncharacterized protein conserved in bacteria (DUF2128). (73 aa)
AEE14090.1Diguanylate cyclase; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Response regulator receiver modulated diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504783828; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (426 aa)
AEE14103.1Hypothetical protein; IMG reference gene:2504783841; PFAM: Sugar-specific transcriptional regulator TrmB. (80 aa)
AEE14108.1InterPro IPR001845; KEGG: regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Regulatory protein ArsR; IMG reference gene:2504783846; PFAM: Bacterial regulatory protein, arsR family. (117 aa)
fusATranslation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] (692 aa)
tufTranslation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (405 aa)
infATranslation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. (74 aa)
AEE14185.1Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367:IPR007167; KEGG: dtu:Dtur_0541 iron (metal) dependent repressor, DtxR family; PFAM: Ferrous iron transporter, FeoA subunit; Iron dependent repressor; SMART: Iron dependent repressor; SPTR: Iron (Metal) dependent repressor, DtxR family; IMG reference gene:2504783926; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain. (213 aa)
nusGNusG antitermination factor; Participates in transcription elongation, termination and antitermination. (179 aa)
rplARibosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (239 aa)
AEE14199.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: ckr:CKR_0361 hypothetical protein; PFAM: HAMP linker domain; Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative uncharacterized protein; IMG reference gene:2504783941; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain. (741 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (721 aa)
murAUDP-N-acetylglucosamine1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (405 aa)
nusANusA antitermination factor; Participates in both transcription termination and antitermination. (340 aa)
infBTranslation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (688 aa)
AEE14263.1KEGG: tte:TTE0750 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504784006; PFAM: Protein of unknown function (DUF2837). (267 aa)
mraZProtein mraZ; COGs: COG2001 conserved hypothetical protein; HAMAP: MraZ; InterPro IPR020603:IPR003444; KEGG: csc:Csac_0916 cell division protein MraZ; PFAM: MraZ domain; SPTR: Protein MraZ; TIGRFAM: MraZ; IMG reference gene:2504784037; PFAM: MraZ protein; TIGRFAM: mraZ protein; Belongs to the MraZ family. (138 aa)
murEUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (487 aa)
mraYPhospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (313 aa)
murDUDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (464 aa)
AEE14299.1Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: cbs:COXBURSA331_A0222 cell division protein FtsW; PFAM: Cell cycle protein; SPTR: Stage V sporulation protein E; IMG reference gene:2504784045; PFAM: Cell cycle protein; Belongs to the SEDS family. (367 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (360 aa)
murCUDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (478 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (295 aa)
ddlD-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (308 aa)
prfAPeptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. (361 aa)
AEE14315.1Cell shape determining protein, MreB/Mrl family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: rod shape-determining protein MreB; PFAM: Cell shape determining protein MreB/Mrl; SPTR: Rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; IMG reference gene:2504784061; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family. (337 aa)
AEE14316.1COGs: COG1792 Cell shape-determining protein; InterPro IPR007221; KEGG: pmx:PERMA_0056 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: Rod shape-determining protein MreC; IMG reference gene:2504784062; PFAM: rod shape-determining protein MreC. (266 aa)
minCSeptum site-determining protein minC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. (225 aa)
AEE14320.1Septum site-determining protein MinD; COGs: COG2894 Septum formation inhibitor-activating ATPase; InterPro IPR002586:IPR010223; KEGG: ctc:CTC02069 septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Septum site-determining protein MinD; TIGRFAM: Septum site-determining protein MinD; IMG reference gene:2504784066; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD. (269 aa)
minECell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. (84 aa)
AEE14322.1Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: dap:Dacet_1268 rod shape-determining protein RodA; PFAM: Cell cycle protein; SPTR: Rod shape-determining protein RodA; IMG reference gene:2504784068; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; Belongs to the SEDS family. (412 aa)
sigARNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (356 aa)
AEE14382.1Helix-turn-helix domain protein; InterPro IPR001387; KEGG: ccb:Clocel_0755 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein; IMG reference gene:2504784134; PFAM: Helix-turn-helix. (122 aa)
AEE14383.1CoA-disulfide reductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR004099:IPR001763; KEGG: afu:AF0400 NADH oxidase (NoxA-3); PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Rhodanese-like; PRIAM: CoA-disulfide reductase; SMART: Rhodanese-like; SPTR: NADH oxidase (NoxA-3); IMG reference gene:2504784135; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain. (565 aa)
mutS2Smr protein/MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (774 aa)
greATranscription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (159 aa)
AEE14397.1Cold-shock DNA-binding domain protein; COGs: COG1278 Cold shock protein; InterPro IPR002059:IPR011129; KEGG: bts:Btus_1957 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-binding domain protein; IMG reference gene:2504784151; PFAM: 'Cold-shock' DNA-binding domain. (68 aa)
hpfSigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (179 aa)
prfBPeptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. (363 aa)
AEE14416.1Regulatory protein MerR; InterPro IPR000551; KEGG: ddf:DEFDS_1926 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Transcriptional regulator, MerR family; IMG reference gene:2504784171; PFAM: MerR family regulatory protein. (109 aa)
AEE14430.1COGs: COG0050 GTPase - translation elongation factors; InterProIPR000795:IPR004161:IPR004160:IPR004541:IPR 005225; KEGG: dth:DICTH_0835 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; SPTR: Elongation factor Tu 1; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; IMG reference gene:2504784189; PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: [...] (405 aa)
AEE13978.1DNA integrity scanning, DisA, linker region; COGs: COG1623 nucleic-acid-binding protein (contains the HHH domain); InterPro IPR003390:IPR018906; KEGG: tjr:TherJR_0249 DNA integrity scanning, DisA, linker region; PFAM: DNA integrity scanning, DisA, linker region; DNA integrity scanning protein, DisA, N-terminal; SPTR: DNA integrity scanning, DisA, linker region; IMG reference gene:2504783709; PFAM: DisA bacterial checkpoint controller nucleotide-binding; DisA bacterial checkpoint controller linker region; Belongs to the DisA family. (362 aa)
AEE14443.1Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG2200 FOG: EAL domain; InterPro IPR013767:IPR000160:IPR001633:IPR000014; KEGG: saf:SULAZ_0401 PAS fold family protein; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; SPTR: PAS fold family protein; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784203; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (842 aa)
AEE14444.1Cold-shock DNA-binding domain protein; COGs: COG1278 Cold shock protein; InterPro IPR002059:IPR011129; KEGG: clo:HMPREF0868_1039 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-binding protein family; IMG reference gene:2504784204; PFAM: 'Cold-shock' DNA-binding domain. (70 aa)
AEE14461.1Protein of unknown function DUF324; InterPro IPR005537; KEGG: thx:Thet_1104 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein; IMG reference gene:2504784222; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated protein. (669 aa)
AEE14464.1COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR003852; KEGG: hya:HY04AAS1_0720 osmosensitive K channel His kinase sensor; PFAM: Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; SPTR: Osmosensitive K channel His kinase sensor; IMG reference gene:2504784225; PFAM: Universal stress protein family; Osmosensitive K+ channel His kinase sensor domain. (644 aa)
uppPUndecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (253 aa)
AEE14479.1COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cni:Calni_1175 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2; IMG reference gene:2504784242; PFAM: Glycosyl transferase family 2. (328 aa)
AEE14488.1KEGG: ttm:Tthe_0868 PilT protein domain protein; SPTR: PilT protein domain protein; IMG reference gene:2504784251. (61 aa)
AEE14489.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (61 aa)
AEE14503.1Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: dae:Dtox_1332 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Transcriptional regulator, MerR family; IMG reference gene:2504784267; PFAM: MerR family regulatory protein; MerR, DNA binding. (131 aa)
AEE14507.1Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR013767:IPR000160:IPR001633:IPR000014; KEGG: afe:Lferr_2664 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S); TIGRFAM: Diguanylate cyclase, predicted; PAS [...] (894 aa)
AEE14516.1UPF0082 protein yeeN; COGs: COG0217 conserved hypothetical protein; HAMAP: Protein of unknown function DUF28; InterPro IPR002876; KEGG: saf:SULAZ_1049 hypothetical protein; PFAM: Protein of unknown function DUF28; SPTR: UPF0082 protein DAMO_2401; TIGRFAM: Protein of unknown function DUF28; manually curated; IMG reference gene:2504784280; PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family. (253 aa)
AEE14528.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: cni:Calni_1776 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504784292; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (297 aa)
AEE14554.1Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: clj:CLJU_c33300 putative LysR family transcriptional regulator; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: LysR substrate binding domain protein; IMG reference gene:2504784319; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family. (294 aa)
AEE14559.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: pmx:PERMA_0750 diguanylate cyclase/phosphodiesterase domain 1; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504784325; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (430 aa)
AEE14570.1Transcriptional regulator, histidine kinase sensor; InterPro IPR018771; KEGG: dal:Dalk_4091 hypothetical protein; PFAM: Transcriptional regulator, histidine kinase sensor, N-terminal; SPTR: Putative uncharacterized protein; IMG reference gene:2504784338; PFAM: Predicted histidine kinase sensor domain. (174 aa)
AEE14573.1Regulatory protein ArsR; InterPro IPR001845; KEGG: pth:PTH_0545 transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Predicted transcriptional regulator; IMG reference gene:2504784341; PFAM: Bacterial regulatory protein, arsR family. (121 aa)
AEE14583.1Response regulator receiver and ANTAR domain protein; COGs: COG3707 Response regulator with putative antiterminator output domain; InterPro IPR001789:IPR005561; KEGG: dth:DICTH_0982 two-component system, regulatory protein; PFAM: Signal transduction response regulator, receiver region; ANTAR; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system, regulatory protein; IMG reference gene:2504784351; PFAM: Response regulator receiver domain; ANTAR domain. (209 aa)
AEE14592.1Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. (634 aa)
AEE14615.1COGs: COG1837 RNA-binding protein (contains KH domain); KEGG: RNA-binding protein (KH domain); SPTR: Putative uncharacterized protein; IMG reference gene:2504784383; PFAM: KH domain; Belongs to the UPF0109 family. (81 aa)
AEE14627.1Multi-copper polyphenol oxidoreductase, laccase; COGs: COG1496 conserved hypothetical protein; InterPro IPR003730; KEGG: sse:Ssed_3498 hypothetical protein; PFAM: Multi-copper polyphenol oxidoreductase, laccase; SPTR: Putative uncharacterized protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; IMG reference gene:2504784395; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; Belongs to the multicopper oxidase YfiH/RL5 family. (255 aa)
AEE14632.1Fmu (Sun) domain protein; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: tit:Thit_1309 sun protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: Sun protein; IMG reference gene:2504784400; PFAM: NOL1/NOP2/sun family; NusB family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (420 aa)
AEE14655.1KEGG: nth:Nther_2943 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504784423. (210 aa)
AEE14672.1COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR001789; KEGG: dma:DMR_04980 response regulator receiver protein; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SPTR: Response regulator receiver modulated diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504784440; PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase [...] (412 aa)
AEE14694.1Hypothetical protein; Manually curated; IMG reference gene:2504784470; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (721 aa)
AEE14708.1Putative transcriptional regulator, GntR family; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR004839; KEGG: aminotransferase; PFAM: Aminotransferase, class I/II; SPTR: Putative transcriptional regulator, GntR family; IMG reference gene:2504784485; PFAM: Aminotransferase class I and II. (389 aa)
AEE14726.1Diguanylate phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: abu:Abu_0830 EAL domain-containing protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted; SPTR: EAL domain protein; IMG reference gene:2504784503; PFAM: EAL domain. (357 aa)
selAL-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (448 aa)
AEE14745.1Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: dth:DICTH_0060 transcriptional regulator, AcrR family; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, AcrR family; IMG reference gene:2504784528; PFAM: Bacterial regulatory proteins, tetR family. (188 aa)
AEE14747.1Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); COGs: COG2200 FOG: EAL domain; InterProIPR000014:IPR000160:IPR001610:IPR001633:IPR 013655:IPR013767:IPR003018; KEGG: ddf:DEFDS_1856 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; PAS fold-3; GAF; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784532; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRF [...] (1160 aa)
AEE14749.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: aar:Acear_1996 diguanylate cyclase with PAS/PAC sensor; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504784535; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (294 aa)
AEE14767.1COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: sua:Saut_0554 pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Pyridine nucleotide-disulfide oxidoreductase dimerization region; IMG reference gene:2504784553; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation [...] (450 aa)
AEE14781.1Proteinase inhibitor I4 serpin; COGs: COG4826 Serine protease inhibitor; InterPro IPR000215; KEGG: sul:SYO3AOP1_1417 proteinase inhibitor I4 serpin; PFAM: Protease inhibitor I4, serpin; SMART: Protease inhibitor I4, serpin; SPTR: Proteinase inhibitor I4 serpin; IMG reference gene:2504784568; PFAM: Serpin (serine protease inhibitor); Belongs to the serpin family. (392 aa)
AEE14794.1Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160:IPR013767; KEGG: afr:AFE_3057 sensory box-containing diguanylate cyclase, putative; PFAM: Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate cyclase, predicted; PAS; SPTR: Sensory box-containing diguanylate cyclase, putative; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504784582; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (588 aa)
AEE14795.1Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (277 aa)
dnaAChromosomal replication initiator protein dnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (442 aa)
AEE13661.1Type IV pilus assembly PilZ; COGs: COG5581 glycosyltransferase; InterPro IPR009875; KEGG: ate:Athe_2150 type IV pilus assembly PilZ; PFAM: Type IV pilus assembly PilZ; SPTR: Type IV pilus assembly PilZ; IMG reference gene:2504783371; PFAM: PilZ domain. (246 aa)
AEE13662.1COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterPro IPR014284:IPR012845:IPR007627:IPR007630; KEGG: aoe:Clos_1510 RNA polymerase, sigma 28 subunit, FliA/WhiG; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; IMG reference gene:2504783372; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family. (223 aa)
AEE13667.1COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: toc:Toce_1111 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; IMG reference gene:2504783377; PFAM: Response regulator receiver domain. (119 aa)
cheBResponse regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (343 aa)
AEE13679.1CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: dma:DMR_20770 chemotaxis protein CheW; PFAM: CheW-like protein; SMART: CheW-like protein; SPTR: CheW protein; IMG reference gene:2504783390; PFAM: CheW-like domain. (162 aa)
AEE13680.1CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207:IPR010808:IPR004105:IPR003594:IPR 002545; KEGG: mta:Moth_0742 CheA signal transduction histidine kinases; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, P2 response regulator-binding; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction histidine kinase, subgroup, homodimeric; CheW-like protein; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPa [...] (682 aa)
AEE13681.1Metal dependent phosphohydrolase; COGs: COG1639 signal transduction protein; InterPro IPR006675:IPR013976:IPR003607; KEGG: cbi:CLJ_B1646 HDIG domain protein; PFAM: Metal-dependent hydrolase HDOD; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: HDIG domain protein; TIGRFAM: HDIG; IMG reference gene:2504783392; PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG. (289 aa)
AEE13684.1Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160:IPR004010:IPR013767; KEGG: has:Halsa_0861 diguanylate cyclase and metal dependent phosphohydrolase; PFAM: Diguanylate cyclase, predicted; PAS fold; Cache; SMART: Diguanylate cyclase, predicted; PAS; SPTR: Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504783395; PFAM: Cache domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (659 aa)
AEE13697.1COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: dma:DMR_07730 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis sensory transducer; IMG reference gene:2504783408; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (728 aa)
efpElongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. (189 aa)
nusBNusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (134 aa)
AEE13797.1COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: nis:NIS_1430 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Glutamine synthetase regulatory protein P-II; IMG reference gene:2504783513; PFAM: Nitrogen regulatory protein P-II. (112 aa)
rny2,3 cyclic-nucleotide 2-phosphodiesterase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. (515 aa)
csrACarbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (79 aa)
AEE13827.1Cobyrinic acid ac-diamide synthase; COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: slp:Slip_0975 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; IMG reference gene:2504783544; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. (328 aa)
AEE13833.1Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dtu:Dtur_1236 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SPTR: PAS/PAC sensor signal transduction histidine kinase; IMG reference gene:2504783550; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A [...] (301 aa)
AEE13834.1Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ttm:Tthe_2686 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family; IMG reference gene:2504783551; PFAM: Response regulator [...] (224 aa)
lepAGTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (600 aa)
AEE13858.1Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004010:IPR003660:IPR004089; KEGG: toc:Toce_0469 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis sensory transducer with Cache sensor; IMG reference gene:2504783575; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (735 aa)
AEE13862.1Transcriptional regulator, BadM/Rrf2 family; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: mta:Moth_1653 BadM/Rrf2 family transcriptional regulator; PFAM: Transcriptional regulator, Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcriptional regulator, Rrf2; IMG reference gene:2504783579; PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein. (141 aa)
AEE13863.1COGs: COG0728 membrane protein putative virulence factor; InterPro IPR004268; KEGG: cst:CLOST_0370 integral membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN; SPTR: Integral membrane protein MviN; IMG reference gene:2504783580; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN. (511 aa)
AEE13871.1COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: dth:DICTH_1399 hypothetical protein; PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related; SPTR: Conserved protein; IMG reference gene:2504783589; PFAM: Memo-like protein; Belongs to the MEMO1 family. (264 aa)
AEE13882.1COGs: COG3276 Selenocysteine-specific translation elongation factor; InterProIPR005225:IPR004535:IPR000795:IPR004161:IPR 015191; KEGG: nth:Nther_1114 selenocysteine-specific translation elongation factor; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor SelB, winged helix, type 3; SPTR: Selenocysteine-specific translation elongation factor; TIGRFAM: Translation elongation factor, selenocysteine-specific; Small GTP-binding protein; IMG reference gene:2504783602; PFAM: Elongation factor Tu domain 2; Elongation f [...] (626 aa)
glmUBifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (461 aa)
AEE13893.1Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: pjd:Pjdr2_3773 transcriptional regulator, LysR family; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Transcriptional regulator, LysR family; IMG reference gene:2504783614; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain. (305 aa)
AEE13904.1Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: rca:Rcas_4215 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2504783625; PFAM: Bacterial regulatory proteins, tetR family. (187 aa)
AEE13908.1Small GTP-binding protein; COGs: COG0480 Translation elongation factors (GTPase); InterPro IPR005225:IPR000795:IPR005517:IPR000640; KEGG: nth:Nther_0010 translation elongation factor 2 (EF-2/EF-G); PFAM: Translation elongation factor EFG/EF2, domain IV; Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor G 2; TIGRFAM: Small GTP-binding protein; IMG reference gene:2504783629; PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF [...] (689 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1111 aa)
infCTranslation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. (187 aa)
AEE13967.1Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160; KEGG: dau:Daud_0417 diguanylate cyclase with PAS/PAC sensor; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: Diguanylate cyclase, predicted; PAS; IMG reference gene:2504783697; PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (638 aa)
AEE13976.1Hypothetical protein; IMG reference gene:2504783707; PFAM: PEGA domain. (143 aa)
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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