STRINGSTRING
AEE14648.1 AEE14648.1 AEE14456.1 AEE14456.1 AEE14610.1 AEE14610.1 AEE14647.1 AEE14647.1 AEE15341.1 AEE15341.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEE14648.1UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: tye:THEYE_A1137 UvrD/REP helicase domain protein, putative; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase domain protein, putative; IMG reference gene:2504784416; PFAM: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1040 aa)
AEE14456.1KEGG: thx:Thet_1099 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504784217; PFAM: Domain of unknown function (DUF1887). (444 aa)
AEE14610.1UPF0102 protein yraN; COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; HAMAP: Uncharacterised protein family UPF0102; InterPro IPR003509; KEGG: fma:FMG_0533 putative endonuclease; PFAM: Uncharacterised protein family UPF0102; SPTR: Putative uncharacterized protein; IMG reference gene:2504784378; PFAM: Uncharacterised protein family UPF0102; Belongs to the UPF0102 family. (117 aa)
AEE14647.1KEGG: tye:THEYE_A1135 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504784415. (949 aa)
AEE15341.1InterPro IPR014082; KEGG: dol:Dole_0739 CRISPR-associated TIGR02710 family; PFAM: CRISPR-associated protein, Cas02710; SPTR: CRISPR-associated protein Cas02710; TIGRFAM: CRISPR-associated protein, Cas02710; IMG reference gene:2504785150; PFAM: CRISPR-associated protein (Cas_Cas02710); TIGRFAM: CRISPR-associated protein, TIGR02710 family. (416 aa)
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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