STRINGSTRING
AEE14452.1 AEE14452.1 AEE14647.1 AEE14647.1 AEE14648.1 AEE14648.1 AEE15331.1 AEE15331.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEE14452.1CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family. (173 aa)
AEE14647.1KEGG: tye:THEYE_A1135 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504784415. (949 aa)
AEE14648.1UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: tye:THEYE_A1137 UvrD/REP helicase domain protein, putative; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase domain protein, putative; IMG reference gene:2504784416; PFAM: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1040 aa)
AEE15331.1Hypothetical protein; KEGG: mru:mru_1184 ATP-dependent DNA helicase UvrD/REP family; SPTR: ATP-dependent DNA helicase UvrD/REP family; IMG reference gene:2504785140; PFAM: Domain of unknown function DUF83. (229 aa)
Your Current Organism:
Thermodesulfobium narugense
NCBI taxonomy Id: 747365
Other names: T. narugense DSM 14796, Thermodesulfobium narugense DSM 14796, Thermodesulfobium narugense Na82, Thermodesulfobium narugense str. DSM 14796, Thermodesulfobium narugense strain DSM 14796, sulfate-reducing bacterium Na82
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