21 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4K6Z7_9AGAM	Glycoside hydrolase family 71 protein. (479 aa)
	W4JUV5_9AGAM	Phospholipase. (855 aa)
	W4JXM6_9AGAM	Glycoside hydrolase family 71 protein. (467 aa)
	W4JZ45_9AGAM	Glycoside hydrolase family 71 protein. (436 aa)
	W4K011_9AGAM	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (677 aa)
	W4K1Q0_9AGAM	Uncharacterized protein; Belongs to the MT-A70-like family. (601 aa)
	W4K1W3_9AGAM	Uncharacterized protein. (709 aa)
	W4K4F0_9AGAM	CAP-Gly domain-containing protein. (1093 aa)
	W4K4Z5_9AGAM	Uncharacterized protein. (595 aa)
	W4K7R7_9AGAM	Uncharacterized protein. (1259 aa)
	W4K847_9AGAM	CVNH domain-containing protein. (124 aa)
	W4KBD7_9AGAM	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (284 aa)
	W4KBS8_9AGAM	Uncharacterized protein. (606 aa)
	W4KC20_9AGAM	Plasma membrane fusion protein PRM1; Involved in cell fusion during mating by stabilizing the plasma membrane fusion event; Belongs to the PRM1 family. (655 aa)
	W4KEF0_9AGAM	Uncharacterized protein. (278 aa)
	W4KEM1_9AGAM	Uncharacterized protein. (170 aa)
	W4KHC3_9AGAM	SH3-domain-containing protein. (703 aa)
	W4KHT8_9AGAM	GTPase-like protein. (191 aa)
	W4KLB0_9AGAM	CAP-Gly domain-containing protein. (1169 aa)
	W4KLD5_9AGAM	MAPKKK-like protein. (1144 aa)
	W4KNT7_9AGAM	PH domain-containing protein. (680 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JUV5_9AGAM	W4K7R7_9AGAM	W4JUV5	W4K7R7	Phospholipase.	Uncharacterized protein.	0.906
W4JUV5_9AGAM	W4KHT8_9AGAM	W4JUV5	W4KHT8	Phospholipase.	GTPase-like protein.	0.457
W4K011_9AGAM	W4K1Q0_9AGAM	W4K011	W4K1Q0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.408
W4K011_9AGAM	W4K4F0_9AGAM	W4K011	W4K4F0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	CAP-Gly domain-containing protein.	0.502
W4K1Q0_9AGAM	W4K011_9AGAM	W4K1Q0	W4K011	Uncharacterized protein; Belongs to the MT-A70-like family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.408
W4K4F0_9AGAM	W4K011_9AGAM	W4K4F0	W4K011	CAP-Gly domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.502
W4K4F0_9AGAM	W4KLB0_9AGAM	W4K4F0	W4KLB0	CAP-Gly domain-containing protein.	CAP-Gly domain-containing protein.	0.775
W4K7R7_9AGAM	W4JUV5_9AGAM	W4K7R7	W4JUV5	Uncharacterized protein.	Phospholipase.	0.906
W4K7R7_9AGAM	W4KHT8_9AGAM	W4K7R7	W4KHT8	Uncharacterized protein.	GTPase-like protein.	0.457
W4KBD7_9AGAM	W4KHT8_9AGAM	W4KBD7	W4KHT8	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	GTPase-like protein.	0.432
W4KBD7_9AGAM	W4KLB0_9AGAM	W4KBD7	W4KLB0	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	CAP-Gly domain-containing protein.	0.948
W4KHC3_9AGAM	W4KHT8_9AGAM	W4KHC3	W4KHT8	SH3-domain-containing protein.	GTPase-like protein.	0.994
W4KHC3_9AGAM	W4KLD5_9AGAM	W4KHC3	W4KLD5	SH3-domain-containing protein.	MAPKKK-like protein.	0.575
W4KHT8_9AGAM	W4JUV5_9AGAM	W4KHT8	W4JUV5	GTPase-like protein.	Phospholipase.	0.457
W4KHT8_9AGAM	W4K7R7_9AGAM	W4KHT8	W4K7R7	GTPase-like protein.	Uncharacterized protein.	0.457
W4KHT8_9AGAM	W4KBD7_9AGAM	W4KHT8	W4KBD7	GTPase-like protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.432
W4KHT8_9AGAM	W4KHC3_9AGAM	W4KHT8	W4KHC3	GTPase-like protein.	SH3-domain-containing protein.	0.994
W4KHT8_9AGAM	W4KLD5_9AGAM	W4KHT8	W4KLD5	GTPase-like protein.	MAPKKK-like protein.	0.411
W4KLB0_9AGAM	W4K4F0_9AGAM	W4KLB0	W4K4F0	CAP-Gly domain-containing protein.	CAP-Gly domain-containing protein.	0.775
W4KLB0_9AGAM	W4KBD7_9AGAM	W4KLB0	W4KBD7	CAP-Gly domain-containing protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.948