11 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4JWA2_9AGAM	Uncharacterized protein. (230 aa)
	W4KRA0_9AGAM	Uncharacterized protein. (505 aa)
	W4KR36_9AGAM	Uncharacterized protein. (1884 aa)
	W4KJP3_9AGAM	Uncharacterized protein. (319 aa)
	W4KIN9_9AGAM	Uncharacterized protein. (836 aa)
	W4KIN2_9AGAM	Uncharacterized protein. (1203 aa)
	W4KC90_9AGAM	Uncharacterized protein. (365 aa)
	W4JWS3_9AGAM	Uncharacterized protein. (347 aa)
	W4JUF1_9AGAM	WD_REPEATS_REGION domain-containing protein. (351 aa)
	W4JUC4_9AGAM	Uncharacterized protein. (752 aa)
	W4JTB6_9AGAM	Uncharacterized protein. (88 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JTB6_9AGAM	W4JUC4_9AGAM	W4JTB6	W4JUC4	Uncharacterized protein.	Uncharacterized protein.	0.892
W4JTB6_9AGAM	W4JUF1_9AGAM	W4JTB6	W4JUF1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.485
W4JTB6_9AGAM	W4JWA2_9AGAM	W4JTB6	W4JWA2	Uncharacterized protein.	Uncharacterized protein.	0.876
W4JTB6_9AGAM	W4JWS3_9AGAM	W4JTB6	W4JWS3	Uncharacterized protein.	Uncharacterized protein.	0.828
W4JTB6_9AGAM	W4KC90_9AGAM	W4JTB6	W4KC90	Uncharacterized protein.	Uncharacterized protein.	0.876
W4JTB6_9AGAM	W4KIN2_9AGAM	W4JTB6	W4KIN2	Uncharacterized protein.	Uncharacterized protein.	0.878
W4JTB6_9AGAM	W4KIN9_9AGAM	W4JTB6	W4KIN9	Uncharacterized protein.	Uncharacterized protein.	0.956
W4JTB6_9AGAM	W4KJP3_9AGAM	W4JTB6	W4KJP3	Uncharacterized protein.	Uncharacterized protein.	0.866
W4JTB6_9AGAM	W4KR36_9AGAM	W4JTB6	W4KR36	Uncharacterized protein.	Uncharacterized protein.	0.957
W4JTB6_9AGAM	W4KRA0_9AGAM	W4JTB6	W4KRA0	Uncharacterized protein.	Uncharacterized protein.	0.956
W4JUC4_9AGAM	W4JTB6_9AGAM	W4JUC4	W4JTB6	Uncharacterized protein.	Uncharacterized protein.	0.892
W4JUC4_9AGAM	W4JUF1_9AGAM	W4JUC4	W4JUF1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.892
W4JUC4_9AGAM	W4JWA2_9AGAM	W4JUC4	W4JWA2	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JUC4_9AGAM	W4JWS3_9AGAM	W4JUC4	W4JWS3	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JUC4_9AGAM	W4KC90_9AGAM	W4JUC4	W4KC90	Uncharacterized protein.	Uncharacterized protein.	0.996
W4JUC4_9AGAM	W4KIN2_9AGAM	W4JUC4	W4KIN2	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JUC4_9AGAM	W4KIN9_9AGAM	W4JUC4	W4KIN9	Uncharacterized protein.	Uncharacterized protein.	0.997
W4JUC4_9AGAM	W4KJP3_9AGAM	W4JUC4	W4KJP3	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JUC4_9AGAM	W4KR36_9AGAM	W4JUC4	W4KR36	Uncharacterized protein.	Uncharacterized protein.	0.916
W4JUC4_9AGAM	W4KRA0_9AGAM	W4JUC4	W4KRA0	Uncharacterized protein.	Uncharacterized protein.	0.996