32 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4JR14_9AGAM	Uncharacterized protein. (64 aa)
	W4JRB6_9AGAM	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (113 aa)
	W4JT42_9AGAM	Uncharacterized protein. (304 aa)
	W4JUR4_9AGAM	TAFII28 domain-containing protein. (106 aa)
	W4JUT0_9AGAM	CBFD_NFYB_HMF domain-containing protein. (179 aa)
	W4JVA1_9AGAM	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
	W4JVD7_9AGAM	TFIIB-type domain-containing protein. (337 aa)
	W4JXW4_9AGAM	HTH TFE/IIEalpha-type domain-containing protein. (511 aa)
	W4JYE7_9AGAM	Uncharacterized protein. (170 aa)
	W4K059_9AGAM	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (164 aa)
	W4K1H3_9AGAM	RPOL4c domain-containing protein. (134 aa)
	W4K254_9AGAM	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
	W4K2C5_9AGAM	BTP domain-containing protein. (549 aa)
	W4K4A8_9AGAM	TFIID_20kDa domain-containing protein. (326 aa)
	W4K4G5_9AGAM	Uncharacterized protein. (290 aa)
	W4K6L1_9AGAM	TAF domain-containing protein. (463 aa)
	W4KAQ6_9AGAM	Uncharacterized protein. (858 aa)
	W4KCT1_9AGAM	TFIIB-type domain-containing protein. (349 aa)
	W4KEK3_9AGAM	TFIIF_beta domain-containing protein. (229 aa)
	W4KEN2_9AGAM	BTP domain-containing protein. (289 aa)
	W4KET5_9AGAM	CBFD_NFYB_HMF domain-containing protein. (146 aa)
	W4KGV0_9AGAM	Uncharacterized protein. (119 aa)
	W4KHN1_9AGAM	Uncharacterized protein. (189 aa)
	W4KJ92_9AGAM	Helicase ATP-binding domain-containing protein. (1328 aa)
	W4KJP7_9AGAM	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (689 aa)
	W4KKL9_9AGAM	Uncharacterized protein. (93 aa)
	W4KLG9_9AGAM	DUF4211 domain-containing protein. (461 aa)
	W4KLZ8_9AGAM	TAFII55_N domain-containing protein. (535 aa)
	W4KMB2_9AGAM	Uncharacterized protein. (1763 aa)
	W4KNW5_9AGAM	DUF3591 domain-containing protein. (706 aa)
	W4KQ64_9AGAM	PHD-type domain-containing protein. (830 aa)
	W4KQT6_9AGAM	Uncharacterized protein. (786 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JR14_9AGAM	W4JRB6_9AGAM	W4JR14	W4JRB6	Uncharacterized protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.784
W4JR14_9AGAM	W4JT42_9AGAM	W4JR14	W4JT42	Uncharacterized protein.	Uncharacterized protein.	0.637
W4JR14_9AGAM	W4JVA1_9AGAM	W4JR14	W4JVA1	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.786
W4JR14_9AGAM	W4JVD7_9AGAM	W4JR14	W4JVD7	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.743
W4JR14_9AGAM	W4JXW4_9AGAM	W4JR14	W4JXW4	Uncharacterized protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.994
W4JR14_9AGAM	W4JYE7_9AGAM	W4JR14	W4JYE7	Uncharacterized protein.	Uncharacterized protein.	0.784
W4JR14_9AGAM	W4K1H3_9AGAM	W4JR14	W4K1H3	Uncharacterized protein.	RPOL4c domain-containing protein.	0.791
W4JR14_9AGAM	W4K254_9AGAM	W4JR14	W4K254	Uncharacterized protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.994
W4JR14_9AGAM	W4K4G5_9AGAM	W4JR14	W4K4G5	Uncharacterized protein.	Uncharacterized protein.	0.784
W4JR14_9AGAM	W4KAQ6_9AGAM	W4JR14	W4KAQ6	Uncharacterized protein.	Uncharacterized protein.	0.991
W4JR14_9AGAM	W4KCT1_9AGAM	W4JR14	W4KCT1	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.743
W4JR14_9AGAM	W4KEK3_9AGAM	W4JR14	W4KEK3	Uncharacterized protein.	TFIIF_beta domain-containing protein.	0.784
W4JR14_9AGAM	W4KHN1_9AGAM	W4JR14	W4KHN1	Uncharacterized protein.	Uncharacterized protein.	0.783
W4JR14_9AGAM	W4KJ92_9AGAM	W4JR14	W4KJ92	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.983
W4JR14_9AGAM	W4KJP7_9AGAM	W4JR14	W4KJP7	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.784
W4JRB6_9AGAM	W4JR14_9AGAM	W4JRB6	W4JR14	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	Uncharacterized protein.	0.784
W4JRB6_9AGAM	W4JT42_9AGAM	W4JRB6	W4JT42	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	Uncharacterized protein.	0.912
W4JRB6_9AGAM	W4JUR4_9AGAM	W4JRB6	W4JUR4	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	TAFII28 domain-containing protein.	0.946
W4JRB6_9AGAM	W4JVA1_9AGAM	W4JRB6	W4JVA1	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.948
W4JRB6_9AGAM	W4JVD7_9AGAM	W4JRB6	W4JVD7	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	TFIIB-type domain-containing protein.	0.943