29 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4K2L8_9AGAM	SET domain-containing protein. (436 aa)
	W4KP38_9AGAM	CMP/dCMP-type deaminase domain-containing protein. (171 aa)
	W4KNG2_9AGAM	PHD domain-containing protein. (383 aa)
	W4KLD4_9AGAM	Uncharacterized protein. (425 aa)
	W4KJB3_9AGAM	Uncharacterized protein. (482 aa)
	EFM6	Protein-lysine N-methyltransferase EFM6; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. METTL21 family. EFM6 subfamily. (277 aa)
	W4KET6_9AGAM	WD_REPEATS_REGION domain-containing protein. (392 aa)
	W4KEC6_9AGAM	Uncharacterized protein. (441 aa)
	W4KDL2_9AGAM	Arrestin_N domain-containing protein. (354 aa)
	W4KD63_9AGAM	Uncharacterized protein. (452 aa)
	W4KCE0_9AGAM	Uncharacterized protein. (322 aa)
	EFM4	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. (235 aa)
	W4K9V7_9AGAM	SET domain-containing protein. (308 aa)
	W4K8Q5_9AGAM	Uncharacterized protein. (466 aa)
	W4K6V4_9AGAM	SET domain-containing protein. (102 aa)
	W4K531_9AGAM	Ribosomal lysine N-methyltransferase 4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that monomethylates 60S ribosomal protein L42. Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SETD6 subfamily. (498 aa)
	W4K4U8_9AGAM	SET domain-containing protein. (223 aa)
	W4K1W2_9AGAM	Uncharacterized protein. (408 aa)
	W4K1S6_9AGAM	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. (739 aa)
	W4K0U9_9AGAM	Uncharacterized protein. (331 aa)
	W4K0T4_9AGAM	Uncharacterized protein. (641 aa)
	W4JZP2_9AGAM	Uncharacterized protein. (191 aa)
	W4JYC0_9AGAM	Uncharacterized protein. (396 aa)
	W4JXU4_9AGAM	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. (433 aa)
	W4JV20_9AGAM	Uncharacterized protein. (164 aa)
	W4JTV8_9AGAM	Uncharacterized protein. (280 aa)
	W4JR31_9AGAM	Uncharacterized protein. (586 aa)
	W4JQF0_9AGAM	SET domain-containing protein. (265 aa)
	W4JQ29_9AGAM	CXC domain-containing protein. (603 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFM4	EFM6	W4KBN8	W4KGN5	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Protein-lysine N-methyltransferase EFM6; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. METTL21 family. EFM6 subfamily.	0.612
EFM4	W4JTV8_9AGAM	W4KBN8	W4JTV8	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Uncharacterized protein.	0.591
EFM4	W4K1W2_9AGAM	W4KBN8	W4K1W2	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Uncharacterized protein.	0.510
EFM6	EFM4	W4KGN5	W4KBN8	Protein-lysine N-methyltransferase EFM6; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. METTL21 family. EFM6 subfamily.	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.612
EFM6	W4JTV8_9AGAM	W4KGN5	W4JTV8	Protein-lysine N-methyltransferase EFM6; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. METTL21 family. EFM6 subfamily.	Uncharacterized protein.	0.571
W4JQ29_9AGAM	W4JV20_9AGAM	W4JQ29	W4JV20	CXC domain-containing protein.	Uncharacterized protein.	0.455
W4JQ29_9AGAM	W4KET6_9AGAM	W4JQ29	W4KET6	CXC domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.529
W4JQF0_9AGAM	W4JV20_9AGAM	W4JQF0	W4JV20	SET domain-containing protein.	Uncharacterized protein.	0.510
W4JQF0_9AGAM	W4KET6_9AGAM	W4JQF0	W4KET6	SET domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.529
W4JR31_9AGAM	W4JV20_9AGAM	W4JR31	W4JV20	Uncharacterized protein.	Uncharacterized protein.	0.551
W4JR31_9AGAM	W4JXU4_9AGAM	W4JR31	W4JXU4	Uncharacterized protein.	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	0.922
W4JR31_9AGAM	W4K1S6_9AGAM	W4JR31	W4K1S6	Uncharacterized protein.	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	0.925
W4JR31_9AGAM	W4K4U8_9AGAM	W4JR31	W4K4U8	Uncharacterized protein.	SET domain-containing protein.	0.907
W4JR31_9AGAM	W4K8Q5_9AGAM	W4JR31	W4K8Q5	Uncharacterized protein.	Uncharacterized protein.	0.900
W4JTV8_9AGAM	EFM4	W4JTV8	W4KBN8	Uncharacterized protein.	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.591
W4JTV8_9AGAM	EFM6	W4JTV8	W4KGN5	Uncharacterized protein.	Protein-lysine N-methyltransferase EFM6; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. METTL21 family. EFM6 subfamily.	0.571
W4JTV8_9AGAM	W4K1W2_9AGAM	W4JTV8	W4K1W2	Uncharacterized protein.	Uncharacterized protein.	0.428
W4JV20_9AGAM	W4JQ29_9AGAM	W4JV20	W4JQ29	Uncharacterized protein.	CXC domain-containing protein.	0.455
W4JV20_9AGAM	W4JQF0_9AGAM	W4JV20	W4JQF0	Uncharacterized protein.	SET domain-containing protein.	0.510
W4JV20_9AGAM	W4JR31_9AGAM	W4JV20	W4JR31	Uncharacterized protein.	Uncharacterized protein.	0.551