12 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4KDB4_9AGAM	Uncharacterized protein; Belongs to the DEAD box helicase family. (482 aa)
	W4KAI9_9AGAM	WD_REPEATS_REGION domain-containing protein. (353 aa)
	W4K3P2_9AGAM	ABC transporter. (1077 aa)
	W4JY87_9AGAM	Uncharacterized protein. (550 aa)
	W4JXS3_9AGAM	Uncharacterized protein. (192 aa)
	SUS1	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] (99 aa)
	W4JQN5_9AGAM	Uncharacterized protein. (488 aa)
	W4KNR3_9AGAM	NTF2 domain-containing protein. (155 aa)
	W4KK05_9AGAM	Uncharacterized protein. (547 aa)
	W4KG96_9AGAM	PCI domain-containing protein. (398 aa)
	W4KDK1_9AGAM	TFIIS N-terminal domain-containing protein. (915 aa)
	W4KAZ5_9AGAM	Uncharacterized protein. (590 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SUS1	W4KAI9_9AGAM	W4JSE2	W4KAI9	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]	WD_REPEATS_REGION domain-containing protein.	0.519
SUS1	W4KAZ5_9AGAM	W4JSE2	W4KAZ5	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]	Uncharacterized protein.	0.714
SUS1	W4KG96_9AGAM	W4JSE2	W4KG96	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]	PCI domain-containing protein.	0.877
W4JQN5_9AGAM	W4KAI9_9AGAM	W4JQN5	W4KAI9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.961
W4JQN5_9AGAM	W4KAZ5_9AGAM	W4JQN5	W4KAZ5	Uncharacterized protein.	Uncharacterized protein.	0.854
W4JQN5_9AGAM	W4KDB4_9AGAM	W4JQN5	W4KDB4	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.980
W4JQN5_9AGAM	W4KNR3_9AGAM	W4JQN5	W4KNR3	Uncharacterized protein.	NTF2 domain-containing protein.	0.717
W4K3P2_9AGAM	W4KAI9_9AGAM	W4K3P2	W4KAI9	ABC transporter.	WD_REPEATS_REGION domain-containing protein.	0.415
W4KAI9_9AGAM	SUS1	W4KAI9	W4JSE2	WD_REPEATS_REGION domain-containing protein.	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]	0.519
W4KAI9_9AGAM	W4JQN5_9AGAM	W4KAI9	W4JQN5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.961
W4KAI9_9AGAM	W4K3P2_9AGAM	W4KAI9	W4K3P2	WD_REPEATS_REGION domain-containing protein.	ABC transporter.	0.415
W4KAI9_9AGAM	W4KAZ5_9AGAM	W4KAI9	W4KAZ5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.996
W4KAI9_9AGAM	W4KDB4_9AGAM	W4KAI9	W4KDB4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.578
W4KAI9_9AGAM	W4KG96_9AGAM	W4KAI9	W4KG96	WD_REPEATS_REGION domain-containing protein.	PCI domain-containing protein.	0.601
W4KAI9_9AGAM	W4KNR3_9AGAM	W4KAI9	W4KNR3	WD_REPEATS_REGION domain-containing protein.	NTF2 domain-containing protein.	0.808
W4KAZ5_9AGAM	SUS1	W4KAZ5	W4JSE2	Uncharacterized protein.	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]	0.714
W4KAZ5_9AGAM	W4JQN5_9AGAM	W4KAZ5	W4JQN5	Uncharacterized protein.	Uncharacterized protein.	0.854
W4KAZ5_9AGAM	W4KAI9_9AGAM	W4KAZ5	W4KAI9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.996
W4KAZ5_9AGAM	W4KDB4_9AGAM	W4KAZ5	W4KDB4	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.738
W4KAZ5_9AGAM	W4KG96_9AGAM	W4KAZ5	W4KG96	Uncharacterized protein.	PCI domain-containing protein.	0.506