12 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4KQ66_9AGAM	Uncharacterized protein. (2016 aa)
	W4K051_9AGAM	Uncharacterized protein. (499 aa)
	W4K1W0_9AGAM	Ubiquitin carboxyl-terminal hydrolase. (537 aa)
	W4JY21_9AGAM	Uncharacterized protein. (149 aa)
	W4JU44_9AGAM	Uncharacterized protein. (1800 aa)
	W4K3N4_9AGAM	Uncharacterized protein. (394 aa)
	W4K7I9_9AGAM	RPN13_C domain-containing protein. (307 aa)
	W4KDJ9_9AGAM	Metallo peptidase M67A. (310 aa)
	W4KFS5_9AGAM	Uncharacterized protein. (340 aa)
	W4KKH0_9AGAM	Uncharacterized protein. (296 aa)
	W4KPB2_9AGAM	Uncharacterized protein. (306 aa)
	W4KQ83_9AGAM	Uncharacterized protein. (1933 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JY21_9AGAM	W4K1W0_9AGAM	W4JY21	W4K1W0	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.446
W4JY21_9AGAM	W4K7I9_9AGAM	W4JY21	W4K7I9	Uncharacterized protein.	RPN13_C domain-containing protein.	0.592
W4K1W0_9AGAM	W4JY21_9AGAM	W4K1W0	W4JY21	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.446
W4K1W0_9AGAM	W4K3N4_9AGAM	W4K1W0	W4K3N4	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.759
W4K1W0_9AGAM	W4K7I9_9AGAM	W4K1W0	W4K7I9	Ubiquitin carboxyl-terminal hydrolase.	RPN13_C domain-containing protein.	0.963
W4K1W0_9AGAM	W4KDJ9_9AGAM	W4K1W0	W4KDJ9	Ubiquitin carboxyl-terminal hydrolase.	Metallo peptidase M67A.	0.999
W4K1W0_9AGAM	W4KFS5_9AGAM	W4K1W0	W4KFS5	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.672
W4K1W0_9AGAM	W4KPB2_9AGAM	W4K1W0	W4KPB2	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.607
W4K1W0_9AGAM	W4KQ66_9AGAM	W4K1W0	W4KQ66	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.607
W4K1W0_9AGAM	W4KQ83_9AGAM	W4K1W0	W4KQ83	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.607
W4K3N4_9AGAM	W4K1W0_9AGAM	W4K3N4	W4K1W0	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.759
W4K3N4_9AGAM	W4K7I9_9AGAM	W4K3N4	W4K7I9	Uncharacterized protein.	RPN13_C domain-containing protein.	0.783
W4K3N4_9AGAM	W4KDJ9_9AGAM	W4K3N4	W4KDJ9	Uncharacterized protein.	Metallo peptidase M67A.	0.937
W4K7I9_9AGAM	W4JY21_9AGAM	W4K7I9	W4JY21	RPN13_C domain-containing protein.	Uncharacterized protein.	0.592
W4K7I9_9AGAM	W4K1W0_9AGAM	W4K7I9	W4K1W0	RPN13_C domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.963
W4K7I9_9AGAM	W4K3N4_9AGAM	W4K7I9	W4K3N4	RPN13_C domain-containing protein.	Uncharacterized protein.	0.783
W4K7I9_9AGAM	W4KDJ9_9AGAM	W4K7I9	W4KDJ9	RPN13_C domain-containing protein.	Metallo peptidase M67A.	0.995
W4K7I9_9AGAM	W4KFS5_9AGAM	W4K7I9	W4KFS5	RPN13_C domain-containing protein.	Uncharacterized protein.	0.592
W4K7I9_9AGAM	W4KPB2_9AGAM	W4K7I9	W4KPB2	RPN13_C domain-containing protein.	Uncharacterized protein.	0.695
W4K7I9_9AGAM	W4KQ66_9AGAM	W4K7I9	W4KQ66	RPN13_C domain-containing protein.	Uncharacterized protein.	0.695