19 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4JTI5_9AGAM	Uncharacterized protein. (740 aa)
	W4KR36_9AGAM	Uncharacterized protein. (1884 aa)
	W4KPM6_9AGAM	Uncharacterized protein. (551 aa)
	W4KPE3_9AGAM	Uncharacterized protein. (255 aa)
	W4KLJ2_9AGAM	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (155 aa)
	W4KK99_9AGAM	Uncharacterized protein. (144 aa)
	W4KK05_9AGAM	Uncharacterized protein. (547 aa)
	W4KJZ5_9AGAM	CCHC-type domain-containing protein. (661 aa)
	W4KIN2_9AGAM	Uncharacterized protein. (1203 aa)
	W4KHI7_9AGAM	Small nuclear ribonucleoprotein G. (77 aa)
	W4KCW5_9AGAM	Uncharacterized protein. (330 aa)
	W4KC90_9AGAM	Uncharacterized protein. (365 aa)
	W4K710_9AGAM	Uncharacterized protein. (808 aa)
	W4K0A4_9AGAM	G-patch domain-containing protein. (953 aa)
	W4JY87_9AGAM	Uncharacterized protein. (550 aa)
	W4JXS3_9AGAM	Uncharacterized protein. (192 aa)
	W4JWS3_9AGAM	Uncharacterized protein. (347 aa)
	W4JWA2_9AGAM	Uncharacterized protein. (230 aa)
	W4JUC4_9AGAM	Uncharacterized protein. (752 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JTI5_9AGAM	W4JUC4_9AGAM	W4JTI5	W4JUC4	Uncharacterized protein.	Uncharacterized protein.	0.961
W4JTI5_9AGAM	W4JWA2_9AGAM	W4JTI5	W4JWA2	Uncharacterized protein.	Uncharacterized protein.	0.947
W4JTI5_9AGAM	W4K0A4_9AGAM	W4JTI5	W4K0A4	Uncharacterized protein.	G-patch domain-containing protein.	0.998
W4JTI5_9AGAM	W4K710_9AGAM	W4JTI5	W4K710	Uncharacterized protein.	Uncharacterized protein.	0.798
W4JTI5_9AGAM	W4KC90_9AGAM	W4JTI5	W4KC90	Uncharacterized protein.	Uncharacterized protein.	0.772
W4JTI5_9AGAM	W4KHI7_9AGAM	W4JTI5	W4KHI7	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.950
W4JTI5_9AGAM	W4KIN2_9AGAM	W4JTI5	W4KIN2	Uncharacterized protein.	Uncharacterized protein.	0.966
W4JTI5_9AGAM	W4KLJ2_9AGAM	W4JTI5	W4KLJ2	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.784
W4JTI5_9AGAM	W4KPE3_9AGAM	W4JTI5	W4KPE3	Uncharacterized protein.	Uncharacterized protein.	0.998
W4JTI5_9AGAM	W4KR36_9AGAM	W4JTI5	W4KR36	Uncharacterized protein.	Uncharacterized protein.	0.497
W4JUC4_9AGAM	W4JTI5_9AGAM	W4JUC4	W4JTI5	Uncharacterized protein.	Uncharacterized protein.	0.961
W4JUC4_9AGAM	W4JWA2_9AGAM	W4JUC4	W4JWA2	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JUC4_9AGAM	W4JWS3_9AGAM	W4JUC4	W4JWS3	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JUC4_9AGAM	W4K0A4_9AGAM	W4JUC4	W4K0A4	Uncharacterized protein.	G-patch domain-containing protein.	0.992
W4JUC4_9AGAM	W4K710_9AGAM	W4JUC4	W4K710	Uncharacterized protein.	Uncharacterized protein.	0.839
W4JUC4_9AGAM	W4KC90_9AGAM	W4JUC4	W4KC90	Uncharacterized protein.	Uncharacterized protein.	0.996
W4JUC4_9AGAM	W4KHI7_9AGAM	W4JUC4	W4KHI7	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.984
W4JUC4_9AGAM	W4KIN2_9AGAM	W4JUC4	W4KIN2	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JUC4_9AGAM	W4KK99_9AGAM	W4JUC4	W4KK99	Uncharacterized protein.	Uncharacterized protein.	0.958
W4JUC4_9AGAM	W4KLJ2_9AGAM	W4JUC4	W4KLJ2	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.893