(8 nodes) Chaperonin TCP-1, conserved site network (Heterobasidion irregulare)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4KKB0_9AGAM	Uncharacterized protein. (554 aa)
	W4KMK2_9AGAM	T-complex protein 1 subunit gamma. (547 aa)
	W4KM34_9AGAM	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (561 aa)
	W4KJP0_9AGAM	T-complex protein 1 subunit delta. (528 aa)
	W4KH76_9AGAM	Uncharacterized protein. (524 aa)
	W4KDY1_9AGAM	Uncharacterized protein. (541 aa)
	W4K4F3_9AGAM	Uncharacterized protein. (551 aa)
	W4JP84_9AGAM	Uncharacterized protein. (552 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JP84_9AGAM	W4K4F3_9AGAM	W4JP84	W4K4F3	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JP84_9AGAM	W4KDY1_9AGAM	W4JP84	W4KDY1	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JP84_9AGAM	W4KH76_9AGAM	W4JP84	W4KH76	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JP84_9AGAM	W4KJP0_9AGAM	W4JP84	W4KJP0	Uncharacterized protein.	T-complex protein 1 subunit delta.	0.999
W4JP84_9AGAM	W4KKB0_9AGAM	W4JP84	W4KKB0	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JP84_9AGAM	W4KM34_9AGAM	W4JP84	W4KM34	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.999
W4JP84_9AGAM	W4KMK2_9AGAM	W4JP84	W4KMK2	Uncharacterized protein.	T-complex protein 1 subunit gamma.	0.999
W4K4F3_9AGAM	W4JP84_9AGAM	W4K4F3	W4JP84	Uncharacterized protein.	Uncharacterized protein.	0.999
W4K4F3_9AGAM	W4KDY1_9AGAM	W4K4F3	W4KDY1	Uncharacterized protein.	Uncharacterized protein.	0.999
W4K4F3_9AGAM	W4KH76_9AGAM	W4K4F3	W4KH76	Uncharacterized protein.	Uncharacterized protein.	0.999
W4K4F3_9AGAM	W4KJP0_9AGAM	W4K4F3	W4KJP0	Uncharacterized protein.	T-complex protein 1 subunit delta.	0.999
W4K4F3_9AGAM	W4KKB0_9AGAM	W4K4F3	W4KKB0	Uncharacterized protein.	Uncharacterized protein.	0.999
W4K4F3_9AGAM	W4KM34_9AGAM	W4K4F3	W4KM34	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.999
W4K4F3_9AGAM	W4KMK2_9AGAM	W4K4F3	W4KMK2	Uncharacterized protein.	T-complex protein 1 subunit gamma.	0.999
W4KDY1_9AGAM	W4JP84_9AGAM	W4KDY1	W4JP84	Uncharacterized protein.	Uncharacterized protein.	0.999
W4KDY1_9AGAM	W4K4F3_9AGAM	W4KDY1	W4K4F3	Uncharacterized protein.	Uncharacterized protein.	0.999
W4KDY1_9AGAM	W4KH76_9AGAM	W4KDY1	W4KH76	Uncharacterized protein.	Uncharacterized protein.	0.999
W4KDY1_9AGAM	W4KJP0_9AGAM	W4KDY1	W4KJP0	Uncharacterized protein.	T-complex protein 1 subunit delta.	0.999
W4KDY1_9AGAM	W4KKB0_9AGAM	W4KDY1	W4KKB0	Uncharacterized protein.	Uncharacterized protein.	0.999
W4KDY1_9AGAM	W4KM34_9AGAM	W4KDY1	W4KM34	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.999